Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CHGBP05060 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHGBP05060 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC18.01■□□□□ 0.47
CHGBP05060 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC18.01■□□□□ 0.47
CHGBP05060 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC18.01■□□□□ 0.47
CHGBP05060 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHGBP05060 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHGBP05060 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CHGBP05060 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC18.01■□□□□ 0.47
CHGBP05060 RIT1-205ENST00000539040 919 ntTSL 2 BASIC18.01■□□□□ 0.47
CHGBP05060 AC010328.2-201ENST00000597698 1111 ntBASIC18.01■□□□□ 0.47
CHGBP05060 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC18.01■□□□□ 0.47
CHGBP05060 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC18.01■□□□□ 0.47
CHGBP05060 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHGBP05060 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHGBP05060 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CHGBP05060 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
CHGBP05060 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHGBP05060 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC18.01■□□□□ 0.47
CHGBP05060 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC18.01■□□□□ 0.47
CHGBP05060 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHGBP05060 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHGBP05060 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHGBP05060 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC18■□□□□ 0.47
CHGBP05060 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHGBP05060 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHGBP05060 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHGBP05060 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
CHGBP05060 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHGBP05060 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHGBP05060 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC18■□□□□ 0.47
CHGBP05060 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHGBP05060 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC18■□□□□ 0.47
CHGBP05060 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC18■□□□□ 0.47
CHGBP05060 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHGBP05060 AC018735.1-201ENST00000437208 1502 ntBASIC18■□□□□ 0.47
CHGBP05060 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHGBP05060 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC18■□□□□ 0.47
CHGBP05060 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHGBP05060 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHGBP05060 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CHGBP05060 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC18■□□□□ 0.47
CHGBP05060 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC18■□□□□ 0.47
CHGBP05060 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHGBP05060 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC18■□□□□ 0.47
CHGBP05060 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHGBP05060 HOMER2P2-201ENST00000451621 847 ntBASIC18■□□□□ 0.47
CHGBP05060 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHGBP05060 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHGBP05060 RPSAP36-202ENST00000494591 1261 ntBASIC18■□□□□ 0.47
CHGBP05060 AC100850.1-201ENST00000506768 649 ntBASIC18■□□□□ 0.47
CHGBP05060 CYGB-203ENST00000589145 788 ntTSL 3 BASIC18■□□□□ 0.47
CHGBP05060 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC18■□□□□ 0.47
CHGBP05060 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHGBP05060 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CHGBP05060 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CHGBP05060 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CHGBP05060 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHGBP05060 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC18■□□□□ 0.47
CHGBP05060 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CHGBP05060 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHGBP05060 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHGBP05060 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHGBP05060 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC18■□□□□ 0.47
CHGBP05060 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC18■□□□□ 0.47
CHGBP05060 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.99■□□□□ 0.47
CHGBP05060 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHGBP05060 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHGBP05060 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHGBP05060 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHGBP05060 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHGBP05060 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.99■□□□□ 0.47
CHGBP05060 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHGBP05060 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHGBP05060 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHGBP05060 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.99■□□□□ 0.47
CHGBP05060 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC17.99■□□□□ 0.47
CHGBP05060 FAM86MP-201ENST00000340703 885 ntBASIC17.99■□□□□ 0.47
CHGBP05060 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CHGBP05060 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHGBP05060 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.99■□□□□ 0.47
CHGBP05060 YBX1P6-201ENST00000442962 1002 ntBASIC17.99■□□□□ 0.47
CHGBP05060 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.99■□□□□ 0.47
CHGBP05060 AC108725.1-201ENST00000495472 409 ntBASIC17.99■□□□□ 0.47
CHGBP05060 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.99■□□□□ 0.47
CHGBP05060 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
CHGBP05060 AC023310.1-201ENST00000554836 735 ntBASIC17.99■□□□□ 0.47
CHGBP05060 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.99■□□□□ 0.47
CHGBP05060 RN7SL560P-201ENST00000577943 264 ntBASIC17.99■□□□□ 0.47
CHGBP05060 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.99■□□□□ 0.47
CHGBP05060 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.99■□□□□ 0.47
CHGBP05060 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.99■□□□□ 0.47
CHGBP05060 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHGBP05060 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHGBP05060 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHGBP05060 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHGBP05060 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHGBP05060 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHGBP05060 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHGBP05060 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms