Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.14□□□□□ -0.15
OPN1SWP03999 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
OPN1SWP03999 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
OPN1SWP03999 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.14□□□□□ -0.15
OPN1SWP03999 AC004066.1-201ENST00000502488 802 ntBASIC14.14□□□□□ -0.15
OPN1SWP03999 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.14□□□□□ -0.15
OPN1SWP03999 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.14□□□□□ -0.15
OPN1SWP03999 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.14□□□□□ -0.15
OPN1SWP03999 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.14□□□□□ -0.15
OPN1SWP03999 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.14□□□□□ -0.15
OPN1SWP03999 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
OPN1SWP03999 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.14□□□□□ -0.15
OPN1SWP03999 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.14□□□□□ -0.15
OPN1SWP03999 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
OPN1SWP03999 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.14□□□□□ -0.15
OPN1SWP03999 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
OPN1SWP03999 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
OPN1SWP03999 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
OPN1SWP03999 AL137783.1-201ENST00000623494 1896 ntBASIC14.14□□□□□ -0.15
OPN1SWP03999 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
OPN1SWP03999 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
OPN1SWP03999 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.14□□□□□ -0.15
OPN1SWP03999 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.14□□□□□ -0.15
OPN1SWP03999 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.14□□□□□ -0.15
OPN1SWP03999 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
OPN1SWP03999 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
OPN1SWP03999 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
OPN1SWP03999 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.14□□□□□ -0.15
OPN1SWP03999 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.14□□□□□ -0.15
OPN1SWP03999 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.14□□□□□ -0.15
OPN1SWP03999 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
OPN1SWP03999 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
OPN1SWP03999 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
OPN1SWP03999 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
OPN1SWP03999 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
OPN1SWP03999 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
OPN1SWP03999 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
OPN1SWP03999 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
OPN1SWP03999 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.13□□□□□ -0.15
OPN1SWP03999 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
OPN1SWP03999 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
OPN1SWP03999 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.13□□□□□ -0.15
OPN1SWP03999 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
OPN1SWP03999 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
OPN1SWP03999 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.13□□□□□ -0.15
OPN1SWP03999 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.13□□□□□ -0.15
OPN1SWP03999 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.13□□□□□ -0.15
OPN1SWP03999 AL589987.1-201ENST00000453380 819 ntBASIC14.13□□□□□ -0.15
OPN1SWP03999 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
OPN1SWP03999 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.13□□□□□ -0.15
OPN1SWP03999 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.13□□□□□ -0.15
OPN1SWP03999 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.13□□□□□ -0.15
OPN1SWP03999 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.13□□□□□ -0.15
OPN1SWP03999 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.13□□□□□ -0.15
OPN1SWP03999 AC140878.1-201ENST00000565277 250 ntBASIC14.13□□□□□ -0.15
OPN1SWP03999 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.13□□□□□ -0.15
OPN1SWP03999 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
OPN1SWP03999 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.13□□□□□ -0.15
OPN1SWP03999 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.13□□□□□ -0.15
OPN1SWP03999 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.13□□□□□ -0.15
OPN1SWP03999 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
OPN1SWP03999 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.13□□□□□ -0.15
OPN1SWP03999 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
OPN1SWP03999 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
OPN1SWP03999 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
OPN1SWP03999 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.13□□□□□ -0.15
OPN1SWP03999 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
OPN1SWP03999 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
OPN1SWP03999 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
OPN1SWP03999 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
OPN1SWP03999 AC015802.1-201ENST00000588104 1449 ntBASIC14.13□□□□□ -0.15
OPN1SWP03999 AC100757.3-201ENST00000622361 1406 ntBASIC14.13□□□□□ -0.15
OPN1SWP03999 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
OPN1SWP03999 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
OPN1SWP03999 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.13□□□□□ -0.15
OPN1SWP03999 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
OPN1SWP03999 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.13□□□□□ -0.15
OPN1SWP03999 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
OPN1SWP03999 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
OPN1SWP03999 AC010327.5-201ENST00000586923 3061 ntBASIC14.13□□□□□ -0.15
OPN1SWP03999 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.13□□□□□ -0.15
OPN1SWP03999 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
OPN1SWP03999 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
OPN1SWP03999 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
OPN1SWP03999 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.13□□□□□ -0.15
OPN1SWP03999 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
OPN1SWP03999 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
OPN1SWP03999 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.12□□□□□ -0.15
OPN1SWP03999 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
OPN1SWP03999 CLK3P2-201ENST00000427566 1453 ntBASIC14.12□□□□□ -0.15
OPN1SWP03999 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
OPN1SWP03999 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
OPN1SWP03999 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.12□□□□□ -0.15
OPN1SWP03999 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
OPN1SWP03999 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
OPN1SWP03999 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.12□□□□□ -0.15
OPN1SWP03999 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.12□□□□□ -0.15
OPN1SWP03999 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.12□□□□□ -0.15
OPN1SWP03999 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
OPN1SWP03999 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms