Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6AP02538 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6AP02538 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
KRT6AP02538 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6AP02538 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
KRT6AP02538 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6AP02538 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6AP02538 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
KRT6AP02538 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.67□□□□□ -0.06
KRT6AP02538 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
KRT6AP02538 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6AP02538 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6AP02538 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.67□□□□□ -0.06
KRT6AP02538 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6AP02538 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.67□□□□□ -0.06
KRT6AP02538 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6AP02538 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.67□□□□□ -0.06
KRT6AP02538 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.67□□□□□ -0.06
KRT6AP02538 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.67□□□□□ -0.06
KRT6AP02538 RRP7BP-205ENST00000566851 833 ntBASIC14.67□□□□□ -0.06
KRT6AP02538 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.67□□□□□ -0.06
KRT6AP02538 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.67□□□□□ -0.06
KRT6AP02538 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.67□□□□□ -0.06
KRT6AP02538 AC106028.4-201ENST00000614509 607 ntBASIC14.67□□□□□ -0.06
KRT6AP02538 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.67□□□□□ -0.06
KRT6AP02538 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6AP02538 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6AP02538 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6AP02538 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.67□□□□□ -0.06
KRT6AP02538 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6AP02538 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6AP02538 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.67□□□□□ -0.06
KRT6AP02538 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6AP02538 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6AP02538 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6AP02538 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6AP02538 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.67□□□□□ -0.06
KRT6AP02538 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.67□□□□□ -0.06
KRT6AP02538 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6AP02538 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6AP02538 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.67□□□□□ -0.06
KRT6AP02538 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
KRT6AP02538 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6AP02538 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6AP02538 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6AP02538 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6AP02538 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6AP02538 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6AP02538 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6AP02538 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6AP02538 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.66□□□□□ -0.06
KRT6AP02538 AC113367.3-201ENST00000508316 1912 ntBASIC14.66□□□□□ -0.06
KRT6AP02538 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.66□□□□□ -0.06
KRT6AP02538 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.66□□□□□ -0.06
KRT6AP02538 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
KRT6AP02538 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6AP02538 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
KRT6AP02538 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
KRT6AP02538 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
KRT6AP02538 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6AP02538 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
KRT6AP02538 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
KRT6AP02538 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.66□□□□□ -0.06
KRT6AP02538 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6AP02538 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6AP02538 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
KRT6AP02538 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.66□□□□□ -0.06
KRT6AP02538 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6AP02538 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6AP02538 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6AP02538 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
KRT6AP02538 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6AP02538 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.66□□□□□ -0.06
KRT6AP02538 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.66□□□□□ -0.06
KRT6AP02538 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6AP02538 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.66□□□□□ -0.06
KRT6AP02538 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.66□□□□□ -0.06
KRT6AP02538 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6AP02538 VDAC1P7-201ENST00000462417 847 ntBASIC14.66□□□□□ -0.06
KRT6AP02538 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.66□□□□□ -0.06
KRT6AP02538 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.66□□□□□ -0.06
KRT6AP02538 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.66□□□□□ -0.06
KRT6AP02538 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.66□□□□□ -0.06
KRT6AP02538 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.66□□□□□ -0.06
KRT6AP02538 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6AP02538 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
KRT6AP02538 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6AP02538 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6AP02538 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
KRT6AP02538 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.66□□□□□ -0.06
KRT6AP02538 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
KRT6AP02538 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6AP02538 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.66□□□□□ -0.06
KRT6AP02538 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.66□□□□□ -0.06
KRT6AP02538 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6AP02538 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6AP02538 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
KRT6AP02538 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6AP02538 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
KRT6AP02538 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms