Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
TOP3BO95985 AC006033.1-201ENST00000440505 426 ntBASIC15.51■□□□□ 0.07
TOP3BO95985 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.51■□□□□ 0.07
TOP3BO95985 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.51■□□□□ 0.07
TOP3BO95985 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.51■□□□□ 0.07
TOP3BO95985 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.51■□□□□ 0.07
TOP3BO95985 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TOP3BO95985 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TOP3BO95985 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.51■□□□□ 0.07
TOP3BO95985 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
TOP3BO95985 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TOP3BO95985 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
TOP3BO95985 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.51■□□□□ 0.07
TOP3BO95985 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TOP3BO95985 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
TOP3BO95985 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TOP3BO95985 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TOP3BO95985 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TOP3BO95985 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.51■□□□□ 0.07
TOP3BO95985 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TOP3BO95985 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.51■□□□□ 0.07
TOP3BO95985 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TOP3BO95985 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TOP3BO95985 LINC01230-201ENST00000625222 3017 ntBASIC15.51■□□□□ 0.07
TOP3BO95985 AC068587.6-202ENST00000641839 5619 ntBASIC15.51■□□□□ 0.07
TOP3BO95985 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TOP3BO95985 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TOP3BO95985 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TOP3BO95985 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TOP3BO95985 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TOP3BO95985 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TOP3BO95985 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TOP3BO95985 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TOP3BO95985 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TOP3BO95985 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.51■□□□□ 0.07
TOP3BO95985 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TOP3BO95985 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TOP3BO95985 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.5■□□□□ 0.07
TOP3BO95985 AP000845.1-201ENST00000581677 2131 ntBASIC15.5■□□□□ 0.07
TOP3BO95985 AC097359.2-201ENST00000604992 2389 ntBASIC15.5■□□□□ 0.07
TOP3BO95985 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TOP3BO95985 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TOP3BO95985 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TOP3BO95985 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TOP3BO95985 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TOP3BO95985 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TOP3BO95985 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TOP3BO95985 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.5■□□□□ 0.07
TOP3BO95985 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TOP3BO95985 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TOP3BO95985 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.5■□□□□ 0.07
TOP3BO95985 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.5■□□□□ 0.07
TOP3BO95985 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TOP3BO95985 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TOP3BO95985 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC15.5■□□□□ 0.07
TOP3BO95985 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TOP3BO95985 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.5■□□□□ 0.07
TOP3BO95985 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TOP3BO95985 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.5■□□□□ 0.07
TOP3BO95985 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.5■□□□□ 0.07
TOP3BO95985 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.5■□□□□ 0.07
TOP3BO95985 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.5■□□□□ 0.07
TOP3BO95985 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.5■□□□□ 0.07
TOP3BO95985 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.5■□□□□ 0.07
TOP3BO95985 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.5■□□□□ 0.07
TOP3BO95985 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TOP3BO95985 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC15.5■□□□□ 0.07
TOP3BO95985 RN7SL560P-201ENST00000577943 264 ntBASIC15.5■□□□□ 0.07
TOP3BO95985 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TOP3BO95985 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TOP3BO95985 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TOP3BO95985 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.5■□□□□ 0.07
TOP3BO95985 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TOP3BO95985 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TOP3BO95985 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.5■□□□□ 0.07
TOP3BO95985 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.5■□□□□ 0.07
TOP3BO95985 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TOP3BO95985 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TOP3BO95985 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TOP3BO95985 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TOP3BO95985 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TOP3BO95985 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TOP3BO95985 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TOP3BO95985 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.5■□□□□ 0.07
TOP3BO95985 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TOP3BO95985 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.5■□□□□ 0.07
TOP3BO95985 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TOP3BO95985 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.5■□□□□ 0.07
TOP3BO95985 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.5■□□□□ 0.07
TOP3BO95985 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
TOP3BO95985 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TOP3BO95985 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TOP3BO95985 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.49■□□□□ 0.07
TOP3BO95985 INTS4P1-203ENST00000641008 3683 ntBASIC15.49■□□□□ 0.07
TOP3BO95985 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
TOP3BO95985 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TOP3BO95985 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.49■□□□□ 0.07
TOP3BO95985 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TOP3BO95985 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TOP3BO95985 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms