Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GGPS1O95749 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GGPS1O95749 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GGPS1O95749 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GGPS1O95749 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GGPS1O95749 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GGPS1O95749 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.85■□□□□ 0.29
GGPS1O95749 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GGPS1O95749 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GGPS1O95749 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GGPS1O95749 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
GGPS1O95749 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GGPS1O95749 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.85■□□□□ 0.29
GGPS1O95749 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GGPS1O95749 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GGPS1O95749 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.85■□□□□ 0.29
GGPS1O95749 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
GGPS1O95749 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GGPS1O95749 SLC25A24P2-201ENST00000415059 510 ntBASIC16.85■□□□□ 0.29
GGPS1O95749 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.85■□□□□ 0.29
GGPS1O95749 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC16.85■□□□□ 0.29
GGPS1O95749 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.85■□□□□ 0.29
GGPS1O95749 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.85■□□□□ 0.29
GGPS1O95749 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.85■□□□□ 0.29
GGPS1O95749 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
GGPS1O95749 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.85■□□□□ 0.29
GGPS1O95749 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC16.85■□□□□ 0.29
GGPS1O95749 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.85■□□□□ 0.29
GGPS1O95749 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
GGPS1O95749 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.85■□□□□ 0.29
GGPS1O95749 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.85■□□□□ 0.29
GGPS1O95749 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.85■□□□□ 0.29
GGPS1O95749 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GGPS1O95749 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.85■□□□□ 0.29
GGPS1O95749 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
GGPS1O95749 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GGPS1O95749 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.85■□□□□ 0.29
GGPS1O95749 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.85■□□□□ 0.29
GGPS1O95749 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
GGPS1O95749 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.85■□□□□ 0.29
GGPS1O95749 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
GGPS1O95749 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GGPS1O95749 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GGPS1O95749 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GGPS1O95749 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.85■□□□□ 0.29
GGPS1O95749 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
GGPS1O95749 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GGPS1O95749 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
GGPS1O95749 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.84■□□□□ 0.29
GGPS1O95749 TNRC18P2-201ENST00000417666 2714 ntBASIC16.84■□□□□ 0.29
GGPS1O95749 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GGPS1O95749 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GGPS1O95749 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.84■□□□□ 0.29
GGPS1O95749 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GGPS1O95749 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GGPS1O95749 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GGPS1O95749 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.84■□□□□ 0.29
GGPS1O95749 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GGPS1O95749 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GGPS1O95749 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GGPS1O95749 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GGPS1O95749 EIF4HP1-201ENST00000453115 687 ntBASIC16.84■□□□□ 0.29
GGPS1O95749 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GGPS1O95749 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.84■□□□□ 0.29
GGPS1O95749 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GGPS1O95749 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.84■□□□□ 0.29
GGPS1O95749 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.84■□□□□ 0.29
GGPS1O95749 AL021578.1-201ENST00000613646 709 ntBASIC16.84■□□□□ 0.29
GGPS1O95749 AL138725.1-201ENST00000407347 1314 ntBASIC16.84■□□□□ 0.29
GGPS1O95749 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.84■□□□□ 0.29
GGPS1O95749 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GGPS1O95749 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GGPS1O95749 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
GGPS1O95749 KRT8P29-201ENST00000420409 1371 ntBASIC16.84■□□□□ 0.29
GGPS1O95749 AC068587.6-202ENST00000641839 5619 ntBASIC16.84■□□□□ 0.29
GGPS1O95749 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GGPS1O95749 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GGPS1O95749 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GGPS1O95749 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
GGPS1O95749 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
GGPS1O95749 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
GGPS1O95749 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GGPS1O95749 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GGPS1O95749 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.84■□□□□ 0.29
GGPS1O95749 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GGPS1O95749 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
GGPS1O95749 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GGPS1O95749 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
GGPS1O95749 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.84■□□□□ 0.29
GGPS1O95749 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
GGPS1O95749 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
GGPS1O95749 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GGPS1O95749 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
GGPS1O95749 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.84■□□□□ 0.29
GGPS1O95749 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GGPS1O95749 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.84■□□□□ 0.29
GGPS1O95749 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
GGPS1O95749 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
GGPS1O95749 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
GGPS1O95749 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms