Protein–RNA interactions for Protein: O95447

LCA5L, Lebercilin-like protein, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5LO95447 AC003102.2-201ENST00000589195 1469 ntBASIC15.99■□□□□ 0.15
LCA5LO95447 CICP16-201ENST00000502609 2813 ntBASIC15.99■□□□□ 0.15
LCA5LO95447 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.99■□□□□ 0.15
LCA5LO95447 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LCA5LO95447 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LCA5LO95447 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LCA5LO95447 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.99■□□□□ 0.15
LCA5LO95447 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.99■□□□□ 0.15
LCA5LO95447 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.99■□□□□ 0.15
LCA5LO95447 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.99■□□□□ 0.15
LCA5LO95447 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
LCA5LO95447 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.99■□□□□ 0.15
LCA5LO95447 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.99■□□□□ 0.15
LCA5LO95447 AL355385.1-201ENST00000606123 409 ntBASIC15.99■□□□□ 0.15
LCA5LO95447 BX539320.1-201ENST00000623759 877 ntBASIC15.99■□□□□ 0.15
LCA5LO95447 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LCA5LO95447 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LCA5LO95447 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LCA5LO95447 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LCA5LO95447 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
LCA5LO95447 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LCA5LO95447 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.99■□□□□ 0.15
LCA5LO95447 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LCA5LO95447 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
LCA5LO95447 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LCA5LO95447 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LCA5LO95447 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LCA5LO95447 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.99■□□□□ 0.15
LCA5LO95447 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LCA5LO95447 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.98■□□□□ 0.15
LCA5LO95447 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCA5LO95447 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.98■□□□□ 0.15
LCA5LO95447 AL137784.3-201ENST00000623858 2288 ntBASIC15.98■□□□□ 0.15
LCA5LO95447 AC067930.6-201ENST00000623257 4947 ntBASIC15.98■□□□□ 0.15
LCA5LO95447 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LCA5LO95447 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCA5LO95447 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.98■□□□□ 0.15
LCA5LO95447 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCA5LO95447 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LCA5LO95447 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCA5LO95447 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LCA5LO95447 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCA5LO95447 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LCA5LO95447 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
LCA5LO95447 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.98■□□□□ 0.15
LCA5LO95447 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.98■□□□□ 0.15
LCA5LO95447 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.98■□□□□ 0.15
LCA5LO95447 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
LCA5LO95447 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.98■□□□□ 0.15
LCA5LO95447 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.98■□□□□ 0.15
LCA5LO95447 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.98■□□□□ 0.15
LCA5LO95447 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.98■□□□□ 0.15
LCA5LO95447 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.98■□□□□ 0.15
LCA5LO95447 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
LCA5LO95447 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LCA5LO95447 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
LCA5LO95447 AC015818.8-201ENST00000587907 1519 ntBASIC15.98■□□□□ 0.15
LCA5LO95447 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
LCA5LO95447 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCA5LO95447 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.98■□□□□ 0.15
LCA5LO95447 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCA5LO95447 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC15.98■□□□□ 0.15
LCA5LO95447 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LCA5LO95447 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LCA5LO95447 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LCA5LO95447 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LCA5LO95447 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.97■□□□□ 0.15
LCA5LO95447 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LCA5LO95447 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LCA5LO95447 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LCA5LO95447 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.97■□□□□ 0.15
LCA5LO95447 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LCA5LO95447 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.97■□□□□ 0.15
LCA5LO95447 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.97■□□□□ 0.15
LCA5LO95447 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.97■□□□□ 0.15
LCA5LO95447 AC022616.1-201ENST00000518688 554 ntBASIC15.97■□□□□ 0.15
LCA5LO95447 AC135586.1-201ENST00000539323 574 ntBASIC15.97■□□□□ 0.15
LCA5LO95447 AC106028.4-201ENST00000614509 607 ntBASIC15.97■□□□□ 0.15
LCA5LO95447 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LCA5LO95447 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LCA5LO95447 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LCA5LO95447 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LCA5LO95447 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LCA5LO95447 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.97■□□□□ 0.15
LCA5LO95447 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LCA5LO95447 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LCA5LO95447 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
LCA5LO95447 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LCA5LO95447 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.97■□□□□ 0.15
LCA5LO95447 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
LCA5LO95447 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LCA5LO95447 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LCA5LO95447 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LCA5LO95447 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LCA5LO95447 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
LCA5LO95447 AC215219.1-201ENST00000400706 1817 ntBASIC15.96■□□□□ 0.15
LCA5LO95447 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LCA5LO95447 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LCA5LO95447 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LCA5LO95447 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms