Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
UPK1BO75841 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UPK1BO75841 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC13.13□□□□□ -0.31
UPK1BO75841 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UPK1BO75841 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
UPK1BO75841 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
UPK1BO75841 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
UPK1BO75841 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.13□□□□□ -0.31
UPK1BO75841 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.13□□□□□ -0.31
UPK1BO75841 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.13□□□□□ -0.31
UPK1BO75841 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UPK1BO75841 AC125807.2-201ENST00000513358 3514 ntBASIC13.13□□□□□ -0.31
UPK1BO75841 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC13.13□□□□□ -0.31
UPK1BO75841 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.13□□□□□ -0.31
UPK1BO75841 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UPK1BO75841 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
UPK1BO75841 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
UPK1BO75841 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
UPK1BO75841 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
UPK1BO75841 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UPK1BO75841 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UPK1BO75841 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
UPK1BO75841 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
UPK1BO75841 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
UPK1BO75841 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.12□□□□□ -0.31
UPK1BO75841 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
UPK1BO75841 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.12□□□□□ -0.31
UPK1BO75841 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UPK1BO75841 AP3S2-216ENST00000617003 1561 ntBASIC13.12□□□□□ -0.31
UPK1BO75841 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UPK1BO75841 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UPK1BO75841 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.12□□□□□ -0.31
UPK1BO75841 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UPK1BO75841 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
UPK1BO75841 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UPK1BO75841 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
UPK1BO75841 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
UPK1BO75841 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC13.12□□□□□ -0.31
UPK1BO75841 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
UPK1BO75841 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
UPK1BO75841 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UPK1BO75841 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.12□□□□□ -0.31
UPK1BO75841 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.12□□□□□ -0.31
UPK1BO75841 BX276092.5-203ENST00000456199 560 ntBASIC13.12□□□□□ -0.31
UPK1BO75841 AC092647.4-201ENST00000457211 535 ntBASIC13.12□□□□□ -0.31
UPK1BO75841 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
UPK1BO75841 AC008550.1-201ENST00000511500 884 ntBASIC13.12□□□□□ -0.31
UPK1BO75841 AC106795.1-205ENST00000512851 1056 ntBASIC13.12□□□□□ -0.31
UPK1BO75841 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.12□□□□□ -0.31
UPK1BO75841 RIN3-211ENST00000557762 517 ntTSL 3 BASIC13.12□□□□□ -0.31
UPK1BO75841 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
UPK1BO75841 AL645728.2-202ENST00000641679 227 ntBASIC13.12□□□□□ -0.31
UPK1BO75841 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC13.12□□□□□ -0.31
UPK1BO75841 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
UPK1BO75841 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
UPK1BO75841 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
UPK1BO75841 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.12□□□□□ -0.31
UPK1BO75841 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
UPK1BO75841 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UPK1BO75841 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UPK1BO75841 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
UPK1BO75841 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
UPK1BO75841 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
UPK1BO75841 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
UPK1BO75841 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UPK1BO75841 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC13.11□□□□□ -0.31
UPK1BO75841 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC13.11□□□□□ -0.31
UPK1BO75841 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UPK1BO75841 CYP4F24P-201ENST00000586049 1580 ntBASIC13.11□□□□□ -0.31
UPK1BO75841 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UPK1BO75841 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
UPK1BO75841 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
UPK1BO75841 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UPK1BO75841 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UPK1BO75841 CLK3P2-201ENST00000427566 1453 ntBASIC13.11□□□□□ -0.31
UPK1BO75841 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UPK1BO75841 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
UPK1BO75841 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
UPK1BO75841 AC015819.3-201ENST00000624305 2674 ntBASIC13.11□□□□□ -0.31
UPK1BO75841 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
UPK1BO75841 PCDHA5-203ENST00000614258 4248 ntBASIC13.11□□□□□ -0.31
UPK1BO75841 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
UPK1BO75841 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
UPK1BO75841 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.11□□□□□ -0.31
UPK1BO75841 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC13.11□□□□□ -0.31
UPK1BO75841 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.11□□□□□ -0.31
UPK1BO75841 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UPK1BO75841 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.11□□□□□ -0.31
UPK1BO75841 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.11□□□□□ -0.31
UPK1BO75841 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
UPK1BO75841 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.11□□□□□ -0.31
UPK1BO75841 DRAXINP1-201ENST00000437611 948 ntBASIC13.11□□□□□ -0.31
UPK1BO75841 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.11□□□□□ -0.31
UPK1BO75841 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.11□□□□□ -0.31
UPK1BO75841 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.11□□□□□ -0.31
UPK1BO75841 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
UPK1BO75841 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.11□□□□□ -0.31
UPK1BO75841 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
UPK1BO75841 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
UPK1BO75841 Z98257.2-202ENST00000641138 1548 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms