Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFPL1O75677 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFPL1O75677 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFPL1O75677 DGCR5-201ENST00000399539 862 ntBASIC15.15■□□□□ 0.02
RFPL1O75677 AL512384.1-201ENST00000406683 331 ntBASIC15.15■□□□□ 0.02
RFPL1O75677 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.15■□□□□ 0.02
RFPL1O75677 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.15■□□□□ 0.02
RFPL1O75677 GNAQP1-201ENST00000444815 1067 ntBASIC15.15■□□□□ 0.02
RFPL1O75677 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RFPL1O75677 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.15■□□□□ 0.02
RFPL1O75677 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFPL1O75677 GAPDHP40-201ENST00000505218 1006 ntBASIC15.15■□□□□ 0.02
RFPL1O75677 DOC2GP-202ENST00000514950 1163 ntBASIC15.15■□□□□ 0.02
RFPL1O75677 SDHAP3-202ENST00000515467 728 ntBASIC15.15■□□□□ 0.02
RFPL1O75677 HILS1-202ENST00000545329 423 ntBASIC15.15■□□□□ 0.02
RFPL1O75677 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.15■□□□□ 0.02
RFPL1O75677 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.15■□□□□ 0.02
RFPL1O75677 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.15■□□□□ 0.02
RFPL1O75677 AC023090.2-201ENST00000625182 2110 ntBASIC15.15■□□□□ 0.02
RFPL1O75677 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
RFPL1O75677 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.15■□□□□ 0.02
RFPL1O75677 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.15■□□□□ 0.02
RFPL1O75677 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RFPL1O75677 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFPL1O75677 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFPL1O75677 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.15■□□□□ 0.02
RFPL1O75677 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFPL1O75677 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFPL1O75677 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RFPL1O75677 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
RFPL1O75677 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RFPL1O75677 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFPL1O75677 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RFPL1O75677 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RFPL1O75677 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RFPL1O75677 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.14■□□□□ 0.01
RFPL1O75677 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RFPL1O75677 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RFPL1O75677 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.14■□□□□ 0.01
RFPL1O75677 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RFPL1O75677 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFPL1O75677 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFPL1O75677 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.14■□□□□ 0.01
RFPL1O75677 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFPL1O75677 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.14■□□□□ 0.01
RFPL1O75677 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFPL1O75677 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFPL1O75677 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.14■□□□□ 0.01
RFPL1O75677 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RFPL1O75677 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RFPL1O75677 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.14■□□□□ 0.01
RFPL1O75677 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.14■□□□□ 0.01
RFPL1O75677 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFPL1O75677 SPDYE19P-201ENST00000338590 713 ntBASIC15.14■□□□□ 0.01
RFPL1O75677 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFPL1O75677 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFPL1O75677 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.14■□□□□ 0.01
RFPL1O75677 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.14■□□□□ 0.01
RFPL1O75677 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.14■□□□□ 0.01
RFPL1O75677 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RFPL1O75677 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RFPL1O75677 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.14■□□□□ 0.01
RFPL1O75677 AC004066.1-201ENST00000502488 802 ntBASIC15.14■□□□□ 0.01
RFPL1O75677 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RFPL1O75677 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.14■□□□□ 0.01
RFPL1O75677 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.14■□□□□ 0.01
RFPL1O75677 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.14■□□□□ 0.01
RFPL1O75677 AC017083.2-201ENST00000608069 979 ntBASIC15.14■□□□□ 0.01
RFPL1O75677 IGHV3-72-202ENST00000621503 303 ntBASIC15.14■□□□□ 0.01
RFPL1O75677 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RFPL1O75677 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFPL1O75677 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.14■□□□□ 0.01
RFPL1O75677 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RFPL1O75677 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFPL1O75677 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.14■□□□□ 0.01
RFPL1O75677 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFPL1O75677 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFPL1O75677 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFPL1O75677 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RFPL1O75677 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RFPL1O75677 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFPL1O75677 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFPL1O75677 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RFPL1O75677 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.13■□□□□ 0.01
RFPL1O75677 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFPL1O75677 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFPL1O75677 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFPL1O75677 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFPL1O75677 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.13■□□□□ 0.01
RFPL1O75677 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RFPL1O75677 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFPL1O75677 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFPL1O75677 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
RFPL1O75677 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.13■□□□□ 0.01
RFPL1O75677 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RFPL1O75677 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RFPL1O75677 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFPL1O75677 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFPL1O75677 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RFPL1O75677 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms