Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
GPC4O75487 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GPC4O75487 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GPC4O75487 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
GPC4O75487 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
GPC4O75487 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GPC4O75487 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
GPC4O75487 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GPC4O75487 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
GPC4O75487 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
GPC4O75487 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GPC4O75487 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GPC4O75487 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.19■□□□□ 0.02
GPC4O75487 AC104457.1-201ENST00000401024 814 ntBASIC15.19■□□□□ 0.02
GPC4O75487 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.19■□□□□ 0.02
GPC4O75487 AC087499.6-201ENST00000411576 835 ntBASIC15.19■□□□□ 0.02
GPC4O75487 PIN1P1-201ENST00000412108 996 ntBASIC15.19■□□□□ 0.02
GPC4O75487 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.19■□□□□ 0.02
GPC4O75487 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GPC4O75487 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.19■□□□□ 0.02
GPC4O75487 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.19■□□□□ 0.02
GPC4O75487 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
GPC4O75487 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.19■□□□□ 0.02
GPC4O75487 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.19■□□□□ 0.02
GPC4O75487 AC092364.2-202ENST00000597012 1073 ntBASIC15.19■□□□□ 0.02
GPC4O75487 CHCHD2P3-201ENST00000603038 451 ntBASIC15.19■□□□□ 0.02
GPC4O75487 AC093726.1-201ENST00000608064 963 ntBASIC15.19■□□□□ 0.02
GPC4O75487 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GPC4O75487 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.19■□□□□ 0.02
GPC4O75487 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC15.19■□□□□ 0.02
GPC4O75487 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GPC4O75487 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
GPC4O75487 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GPC4O75487 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GPC4O75487 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GPC4O75487 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GPC4O75487 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GPC4O75487 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GPC4O75487 CICP11-201ENST00000434745 2827 ntBASIC15.19■□□□□ 0.02
GPC4O75487 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
GPC4O75487 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
GPC4O75487 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
GPC4O75487 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.19■□□□□ 0.02
GPC4O75487 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
GPC4O75487 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC15.18■□□□□ 0.02
GPC4O75487 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GPC4O75487 AL031595.1-201ENST00000623969 4709 ntBASIC15.18■□□□□ 0.02
GPC4O75487 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
GPC4O75487 DRD5P1-201ENST00000456605 1438 ntBASIC15.18■□□□□ 0.02
GPC4O75487 DKFZP434A062-201ENST00000573103 5021 ntBASIC15.18■□□□□ 0.02
GPC4O75487 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GPC4O75487 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.18■□□□□ 0.02
GPC4O75487 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.18■□□□□ 0.02
GPC4O75487 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
GPC4O75487 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.18■□□□□ 0.02
GPC4O75487 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
GPC4O75487 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
GPC4O75487 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GPC4O75487 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.18■□□□□ 0.02
GPC4O75487 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GPC4O75487 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.18■□□□□ 0.02
GPC4O75487 GHSR-202ENST00000427970 912 ntBASIC15.18■□□□□ 0.02
GPC4O75487 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.18■□□□□ 0.02
GPC4O75487 TERF1P3-201ENST00000505638 1227 ntBASIC15.18■□□□□ 0.02
GPC4O75487 AC026410.3-201ENST00000514280 936 ntBASIC15.18■□□□□ 0.02
GPC4O75487 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.18■□□□□ 0.02
GPC4O75487 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.18■□□□□ 0.02
GPC4O75487 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.18■□□□□ 0.02
GPC4O75487 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
GPC4O75487 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GPC4O75487 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
GPC4O75487 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.18■□□□□ 0.02
GPC4O75487 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.18■□□□□ 0.02
GPC4O75487 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
GPC4O75487 AL359258.3-201ENST00000622910 2331 ntBASIC15.18■□□□□ 0.02
GPC4O75487 AC005912.2-201ENST00000619492 2400 ntBASIC15.18■□□□□ 0.02
GPC4O75487 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GPC4O75487 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
GPC4O75487 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
GPC4O75487 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.18■□□□□ 0.02
GPC4O75487 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
GPC4O75487 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
GPC4O75487 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
GPC4O75487 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
GPC4O75487 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GPC4O75487 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.18■□□□□ 0.02
GPC4O75487 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.18■□□□□ 0.02
GPC4O75487 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GPC4O75487 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GPC4O75487 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
GPC4O75487 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.17■□□□□ 0.02
GPC4O75487 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
GPC4O75487 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
GPC4O75487 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
GPC4O75487 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GPC4O75487 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
GPC4O75487 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
GPC4O75487 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GPC4O75487 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
GPC4O75487 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms