Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH16O75309 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH16O75309 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.28■□□□□ 0.04
CDH16O75309 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.28■□□□□ 0.04
CDH16O75309 AP006288.1-201ENST00000446065 395 ntBASIC15.28■□□□□ 0.04
CDH16O75309 CEND1P1-201ENST00000451006 455 ntBASIC15.28■□□□□ 0.04
CDH16O75309 AC004967.1-201ENST00000453589 447 ntBASIC15.28■□□□□ 0.04
CDH16O75309 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH16O75309 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH16O75309 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.28■□□□□ 0.04
CDH16O75309 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.28■□□□□ 0.04
CDH16O75309 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH16O75309 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.28■□□□□ 0.04
CDH16O75309 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH16O75309 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.28■□□□□ 0.04
CDH16O75309 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH16O75309 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CDH16O75309 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH16O75309 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH16O75309 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH16O75309 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH16O75309 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CDH16O75309 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH16O75309 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH16O75309 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CDH16O75309 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH16O75309 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH16O75309 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CDH16O75309 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CDH16O75309 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH16O75309 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH16O75309 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH16O75309 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH16O75309 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH16O75309 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH16O75309 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH16O75309 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH16O75309 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CDH16O75309 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH16O75309 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH16O75309 AC254562.1-201ENST00000417586 456 ntBASIC15.27■□□□□ 0.04
CDH16O75309 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
CDH16O75309 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.27■□□□□ 0.04
CDH16O75309 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.27■□□□□ 0.04
CDH16O75309 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH16O75309 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH16O75309 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH16O75309 AC004066.1-201ENST00000502488 802 ntBASIC15.27■□□□□ 0.04
CDH16O75309 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.27■□□□□ 0.04
CDH16O75309 AC022145.2-201ENST00000598203 171 ntBASIC15.27■□□□□ 0.04
CDH16O75309 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH16O75309 AC139530.3-201ENST00000620344 690 ntBASIC15.27■□□□□ 0.04
CDH16O75309 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH16O75309 AL033527.5-202ENST00000641632 1098 ntBASIC15.27■□□□□ 0.04
CDH16O75309 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.27■□□□□ 0.03
CDH16O75309 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.27■□□□□ 0.03
CDH16O75309 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.27■□□□□ 0.03
CDH16O75309 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH16O75309 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.27■□□□□ 0.03
CDH16O75309 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH16O75309 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH16O75309 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDH16O75309 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDH16O75309 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.27■□□□□ 0.03
CDH16O75309 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.27■□□□□ 0.03
CDH16O75309 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.27■□□□□ 0.03
CDH16O75309 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH16O75309 AC107918.4-201ENST00000641966 3141 ntBASIC15.27■□□□□ 0.03
CDH16O75309 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDH16O75309 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH16O75309 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH16O75309 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH16O75309 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.27■□□□□ 0.03
CDH16O75309 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH16O75309 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH16O75309 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDH16O75309 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH16O75309 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH16O75309 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CDH16O75309 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH16O75309 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH16O75309 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH16O75309 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH16O75309 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH16O75309 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH16O75309 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC15.26■□□□□ 0.03
CDH16O75309 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH16O75309 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH16O75309 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CDH16O75309 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH16O75309 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH16O75309 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
CDH16O75309 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH16O75309 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH16O75309 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH16O75309 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH16O75309 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH16O75309 FAM58DP-201ENST00000428076 619 ntBASIC15.26■□□□□ 0.03
CDH16O75309 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH16O75309 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms