Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
ZIC3O60481 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZIC3O60481 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ZIC3O60481 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZIC3O60481 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.52□□□□□ -0.25
ZIC3O60481 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC3O60481 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC3O60481 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC3O60481 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.51□□□□□ -0.25
ZIC3O60481 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC3O60481 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC3O60481 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC3O60481 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC3O60481 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.51□□□□□ -0.25
ZIC3O60481 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC3O60481 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC3O60481 AC018442.1-201ENST00000421439 2061 ntBASIC13.51□□□□□ -0.25
ZIC3O60481 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC3O60481 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC3O60481 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC3O60481 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.51□□□□□ -0.25
ZIC3O60481 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC3O60481 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC3O60481 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC3O60481 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.51□□□□□ -0.25
ZIC3O60481 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC3O60481 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC3O60481 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.51□□□□□ -0.25
ZIC3O60481 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.51□□□□□ -0.25
ZIC3O60481 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
ZIC3O60481 GOLGA2P4-201ENST00000441462 777 ntBASIC13.51□□□□□ -0.25
ZIC3O60481 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC3O60481 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.51□□□□□ -0.25
ZIC3O60481 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.51□□□□□ -0.25
ZIC3O60481 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.51□□□□□ -0.25
ZIC3O60481 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.51□□□□□ -0.25
ZIC3O60481 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC3O60481 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
ZIC3O60481 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
ZIC3O60481 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC3O60481 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC3O60481 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC3O60481 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC3O60481 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC3O60481 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC3O60481 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
ZIC3O60481 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC3O60481 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC3O60481 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ZIC3O60481 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
ZIC3O60481 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.5□□□□□ -0.25
ZIC3O60481 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.5□□□□□ -0.25
ZIC3O60481 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC3O60481 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
ZIC3O60481 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
ZIC3O60481 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.5□□□□□ -0.25
ZIC3O60481 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
ZIC3O60481 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.5□□□□□ -0.25
ZIC3O60481 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
ZIC3O60481 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC3O60481 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.5□□□□□ -0.25
ZIC3O60481 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC3O60481 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC3O60481 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.5□□□□□ -0.25
ZIC3O60481 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC3O60481 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC3O60481 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC3O60481 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC3O60481 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.5□□□□□ -0.25
ZIC3O60481 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.5□□□□□ -0.25
ZIC3O60481 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.5□□□□□ -0.25
ZIC3O60481 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
ZIC3O60481 EEF1DP1-201ENST00000585891 896 ntBASIC13.5□□□□□ -0.25
ZIC3O60481 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.5□□□□□ -0.25
ZIC3O60481 AL358472.3-201ENST00000608147 415 ntBASIC13.5□□□□□ -0.25
ZIC3O60481 BX088702.1-201ENST00000610784 235 ntBASIC13.5□□□□□ -0.25
ZIC3O60481 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.5□□□□□ -0.25
ZIC3O60481 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
ZIC3O60481 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.5□□□□□ -0.25
ZIC3O60481 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC3O60481 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC3O60481 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC3O60481 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
ZIC3O60481 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.5□□□□□ -0.25
ZIC3O60481 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC3O60481 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC3O60481 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC3O60481 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ZIC3O60481 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.49□□□□□ -0.25
ZIC3O60481 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.49□□□□□ -0.25
ZIC3O60481 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZIC3O60481 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ZIC3O60481 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZIC3O60481 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZIC3O60481 AC015818.8-201ENST00000587907 1519 ntBASIC13.49□□□□□ -0.25
ZIC3O60481 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZIC3O60481 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
ZIC3O60481 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZIC3O60481 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZIC3O60481 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms