Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 AL590640.2-201ENST00000457038 527 ntBASIC18.57■□□□□ 0.56
SMARCA5O60264 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.57■□□□□ 0.56
SMARCA5O60264 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.57■□□□□ 0.56
SMARCA5O60264 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMARCA5O60264 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC18.57■□□□□ 0.56
SMARCA5O60264 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC18.57■□□□□ 0.56
SMARCA5O60264 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
SMARCA5O60264 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC18.57■□□□□ 0.56
SMARCA5O60264 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMARCA5O60264 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMARCA5O60264 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMARCA5O60264 FOS-202ENST00000535987 1402 ntTSL 2 BASIC18.57■□□□□ 0.56
SMARCA5O60264 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMARCA5O60264 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMARCA5O60264 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCA5O60264 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCA5O60264 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC18.56■□□□□ 0.56
SMARCA5O60264 AC020910.5-201ENST00000623668 1865 ntBASIC18.56■□□□□ 0.56
SMARCA5O60264 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCA5O60264 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCA5O60264 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC18.56■□□□□ 0.56
SMARCA5O60264 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
SMARCA5O60264 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC18.56■□□□□ 0.56
SMARCA5O60264 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC18.56■□□□□ 0.56
SMARCA5O60264 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC18.56■□□□□ 0.56
SMARCA5O60264 CLUHP2-201ENST00000426660 1303 ntBASIC18.56■□□□□ 0.56
SMARCA5O60264 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCA5O60264 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCA5O60264 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC18.56■□□□□ 0.56
SMARCA5O60264 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCA5O60264 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
SMARCA5O60264 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.56■□□□□ 0.56
SMARCA5O60264 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
SMARCA5O60264 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCA5O60264 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCA5O60264 CROCCP4-201ENST00000457096 498 ntBASIC18.56■□□□□ 0.56
SMARCA5O60264 FTH1P14-201ENST00000482930 551 ntBASIC18.56■□□□□ 0.56
SMARCA5O60264 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCA5O60264 AC012645.4-201ENST00000610691 1061 ntBASIC18.56■□□□□ 0.56
SMARCA5O60264 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC18.56■□□□□ 0.56
SMARCA5O60264 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.56■□□□□ 0.56
SMARCA5O60264 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC18.56■□□□□ 0.56
SMARCA5O60264 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCA5O60264 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCA5O60264 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCA5O60264 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCA5O60264 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCA5O60264 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCA5O60264 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCA5O60264 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SMARCA5O60264 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SMARCA5O60264 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
SMARCA5O60264 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
SMARCA5O60264 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC18.55■□□□□ 0.56
SMARCA5O60264 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCA5O60264 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC18.55■□□□□ 0.56
SMARCA5O60264 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCA5O60264 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCA5O60264 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCA5O60264 AC113367.3-201ENST00000508316 1912 ntBASIC18.55■□□□□ 0.56
SMARCA5O60264 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
SMARCA5O60264 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC18.55■□□□□ 0.56
SMARCA5O60264 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCA5O60264 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SMARCA5O60264 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.55■□□□□ 0.56
SMARCA5O60264 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SMARCA5O60264 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC18.55■□□□□ 0.56
SMARCA5O60264 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCA5O60264 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
SMARCA5O60264 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SMARCA5O60264 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCA5O60264 AC003102.2-201ENST00000589195 1469 ntBASIC18.55■□□□□ 0.56
SMARCA5O60264 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCA5O60264 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.55■□□□□ 0.56
SMARCA5O60264 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.55■□□□□ 0.56
SMARCA5O60264 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC18.55■□□□□ 0.56
SMARCA5O60264 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.55■□□□□ 0.56
SMARCA5O60264 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.55■□□□□ 0.56
SMARCA5O60264 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC18.55■□□□□ 0.56
SMARCA5O60264 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.55■□□□□ 0.56
SMARCA5O60264 BTNL10-201ENST00000595971 695 ntBASIC18.55■□□□□ 0.56
SMARCA5O60264 ECM1P1-201ENST00000604092 1279 ntBASIC18.55■□□□□ 0.56
SMARCA5O60264 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.55■□□□□ 0.56
SMARCA5O60264 ETV2-208ENST00000621247 941 ntTSL 5 BASIC18.55■□□□□ 0.56
SMARCA5O60264 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.55■□□□□ 0.56
SMARCA5O60264 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
SMARCA5O60264 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCA5O60264 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCA5O60264 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCA5O60264 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC18.55■□□□□ 0.56
SMARCA5O60264 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCA5O60264 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCA5O60264 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC18.55■□□□□ 0.56
SMARCA5O60264 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCA5O60264 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCA5O60264 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCA5O60264 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCA5O60264 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMARCA5O60264 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMARCA5O60264 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms