Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
XRCC2O43543 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
XRCC2O43543 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.17□□□□□ -0.3
XRCC2O43543 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
XRCC2O43543 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
XRCC2O43543 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
XRCC2O43543 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.17□□□□□ -0.3
XRCC2O43543 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
XRCC2O43543 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
XRCC2O43543 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
XRCC2O43543 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
XRCC2O43543 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
XRCC2O43543 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
XRCC2O43543 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.16□□□□□ -0.3
XRCC2O43543 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
XRCC2O43543 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.16□□□□□ -0.3
XRCC2O43543 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.16□□□□□ -0.3
XRCC2O43543 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
XRCC2O43543 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
XRCC2O43543 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
XRCC2O43543 AC232323.1-201ENST00000540724 2099 ntBASIC13.16□□□□□ -0.3
XRCC2O43543 REXO1L5P-201ENST00000622260 2098 ntBASIC13.16□□□□□ -0.3
XRCC2O43543 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
XRCC2O43543 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.16□□□□□ -0.3
XRCC2O43543 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
XRCC2O43543 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
XRCC2O43543 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.16□□□□□ -0.3
XRCC2O43543 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
XRCC2O43543 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
XRCC2O43543 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
XRCC2O43543 TSPY16P-201ENST00000449843 468 ntBASIC13.16□□□□□ -0.3
XRCC2O43543 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.16□□□□□ -0.3
XRCC2O43543 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.16□□□□□ -0.3
XRCC2O43543 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
XRCC2O43543 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.16□□□□□ -0.3
XRCC2O43543 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.16□□□□□ -0.3
XRCC2O43543 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
XRCC2O43543 SERBP1P5-201ENST00000510079 1181 ntBASIC13.16□□□□□ -0.3
XRCC2O43543 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.16□□□□□ -0.3
XRCC2O43543 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.16□□□□□ -0.3
XRCC2O43543 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.16□□□□□ -0.3
XRCC2O43543 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.16□□□□□ -0.3
XRCC2O43543 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.16□□□□□ -0.3
XRCC2O43543 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.16□□□□□ -0.3
XRCC2O43543 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.16□□□□□ -0.3
XRCC2O43543 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
XRCC2O43543 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
XRCC2O43543 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
XRCC2O43543 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.16□□□□□ -0.3
XRCC2O43543 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.16□□□□□ -0.3
XRCC2O43543 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
XRCC2O43543 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
XRCC2O43543 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.16□□□□□ -0.3
XRCC2O43543 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
XRCC2O43543 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
XRCC2O43543 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
XRCC2O43543 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
XRCC2O43543 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
XRCC2O43543 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.16□□□□□ -0.3
XRCC2O43543 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
XRCC2O43543 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
XRCC2O43543 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
XRCC2O43543 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
XRCC2O43543 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
XRCC2O43543 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
XRCC2O43543 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
XRCC2O43543 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
XRCC2O43543 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
XRCC2O43543 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.15□□□□□ -0.3
XRCC2O43543 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
XRCC2O43543 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
XRCC2O43543 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
XRCC2O43543 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
XRCC2O43543 KRT8P22-201ENST00000562317 1415 ntBASIC13.15□□□□□ -0.3
XRCC2O43543 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
XRCC2O43543 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
XRCC2O43543 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.15□□□□□ -0.3
XRCC2O43543 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
XRCC2O43543 CICP14-201ENST00000629111 2732 ntBASIC13.15□□□□□ -0.3
XRCC2O43543 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
XRCC2O43543 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.15□□□□□ -0.3
XRCC2O43543 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
XRCC2O43543 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
XRCC2O43543 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
XRCC2O43543 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
XRCC2O43543 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.15□□□□□ -0.3
XRCC2O43543 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
XRCC2O43543 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
XRCC2O43543 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
XRCC2O43543 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
XRCC2O43543 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
XRCC2O43543 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
XRCC2O43543 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
XRCC2O43543 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
XRCC2O43543 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
XRCC2O43543 AL157414.3-201ENST00000624276 1954 ntBASIC13.15□□□□□ -0.3
XRCC2O43543 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
XRCC2O43543 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.15□□□□□ -0.3
XRCC2O43543 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
XRCC2O43543 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms