Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.18□□□□□ -0.3
CCL21O00585 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL21O00585 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CCL21O00585 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCL21O00585 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL21O00585 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL21O00585 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL21O00585 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL21O00585 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL21O00585 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCL21O00585 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.18□□□□□ -0.3
CCL21O00585 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL21O00585 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL21O00585 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL21O00585 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL21O00585 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL21O00585 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.17□□□□□ -0.3
CCL21O00585 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL21O00585 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL21O00585 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CCL21O00585 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL21O00585 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CCL21O00585 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL21O00585 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL21O00585 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CCL21O00585 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CCL21O00585 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.17□□□□□ -0.3
CCL21O00585 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL21O00585 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.17□□□□□ -0.3
CCL21O00585 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL21O00585 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL21O00585 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL21O00585 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL21O00585 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL21O00585 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.17□□□□□ -0.3
CCL21O00585 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC13.17□□□□□ -0.3
CCL21O00585 AC026320.2-201ENST00000434379 478 ntBASIC13.17□□□□□ -0.3
CCL21O00585 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.17□□□□□ -0.3
CCL21O00585 CFL1-206ENST00000527344 962 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL21O00585 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL21O00585 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC13.17□□□□□ -0.3
CCL21O00585 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CCL21O00585 TPM1-223ENST00000560445 485 ntTSL 3 BASIC13.17□□□□□ -0.3
CCL21O00585 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC13.17□□□□□ -0.3
CCL21O00585 STUB1-204ENST00000564370 875 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL21O00585 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC13.17□□□□□ -0.3
CCL21O00585 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.17□□□□□ -0.3
CCL21O00585 AP001065.2-201ENST00000617205 644 ntBASIC13.17□□□□□ -0.3
CCL21O00585 AC027601.3-201ENST00000622907 509 ntBASIC13.17□□□□□ -0.3
CCL21O00585 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC13.17□□□□□ -0.3
CCL21O00585 Z98259.2-201ENST00000641583 609 ntBASIC13.17□□□□□ -0.3
CCL21O00585 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL21O00585 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL21O00585 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL21O00585 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL21O00585 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL21O00585 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL21O00585 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL21O00585 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL21O00585 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL21O00585 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL21O00585 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
CCL21O00585 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL21O00585 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL21O00585 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL21O00585 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL21O00585 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL21O00585 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL21O00585 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.16□□□□□ -0.3
CCL21O00585 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL21O00585 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL21O00585 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.16□□□□□ -0.3
CCL21O00585 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CCL21O00585 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CCL21O00585 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL21O00585 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL21O00585 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL21O00585 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CCL21O00585 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL21O00585 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL21O00585 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CCL21O00585 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL21O00585 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL21O00585 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC13.16□□□□□ -0.3
CCL21O00585 OR2K2-202ENST00000374428 1038 ntBASIC13.16□□□□□ -0.3
CCL21O00585 NCR3-202ENST00000376071 541 ntTSL 5 BASIC13.16□□□□□ -0.3
CCL21O00585 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL21O00585 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL21O00585 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.16□□□□□ -0.3
CCL21O00585 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC13.16□□□□□ -0.3
CCL21O00585 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL21O00585 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC13.16□□□□□ -0.3
CCL21O00585 AL031713.1-201ENST00000564813 661 ntBASIC13.16□□□□□ -0.3
CCL21O00585 AC026803.1-201ENST00000569130 274 ntBASIC13.16□□□□□ -0.3
CCL21O00585 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL21O00585 AL109837.1-201ENST00000603272 613 ntBASIC13.16□□□□□ -0.3
CCL21O00585 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL21O00585 MIR6769A-201ENST00000617340 73 ntBASIC13.16□□□□□ -0.3
CCL21O00585 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC13.16□□□□□ -0.3
CCL21O00585 NORAD-201ENST00000565493 5339 ntBASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms