Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
FOXN3O00409 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXN3O00409 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.12■□□□□ 0.17
FOXN3O00409 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXN3O00409 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FOXN3O00409 FLJ16779-201ENST00000612722 7638 ntBASIC16.12■□□□□ 0.17
FOXN3O00409 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FOXN3O00409 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FOXN3O00409 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FOXN3O00409 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.12■□□□□ 0.17
FOXN3O00409 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXN3O00409 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.12■□□□□ 0.17
FOXN3O00409 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FOXN3O00409 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.12■□□□□ 0.17
FOXN3O00409 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
FOXN3O00409 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.12■□□□□ 0.17
FOXN3O00409 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.12■□□□□ 0.17
FOXN3O00409 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FOXN3O00409 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.12■□□□□ 0.17
FOXN3O00409 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.12■□□□□ 0.17
FOXN3O00409 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.12■□□□□ 0.17
FOXN3O00409 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXN3O00409 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FOXN3O00409 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FOXN3O00409 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXN3O00409 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXN3O00409 KRT8P35-201ENST00000483942 1338 ntBASIC16.12■□□□□ 0.17
FOXN3O00409 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXN3O00409 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXN3O00409 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXN3O00409 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FOXN3O00409 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXN3O00409 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FOXN3O00409 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXN3O00409 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXN3O00409 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXN3O00409 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FOXN3O00409 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FOXN3O00409 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXN3O00409 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXN3O00409 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.11■□□□□ 0.17
FOXN3O00409 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXN3O00409 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
FOXN3O00409 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
FOXN3O00409 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
FOXN3O00409 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
FOXN3O00409 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.11■□□□□ 0.17
FOXN3O00409 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
FOXN3O00409 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
FOXN3O00409 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.11■□□□□ 0.17
FOXN3O00409 MYO15B-237ENST00000642007 4893 ntBASIC16.11■□□□□ 0.17
FOXN3O00409 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXN3O00409 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXN3O00409 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXN3O00409 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FOXN3O00409 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.11■□□□□ 0.17
FOXN3O00409 CRB3P1-201ENST00000449338 276 ntBASIC16.11■□□□□ 0.17
FOXN3O00409 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FOXN3O00409 KRT18P25-201ENST00000508931 1278 ntBASIC16.11■□□□□ 0.17
FOXN3O00409 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
FOXN3O00409 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.11■□□□□ 0.17
FOXN3O00409 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.11■□□□□ 0.17
FOXN3O00409 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
FOXN3O00409 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.11■□□□□ 0.17
FOXN3O00409 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXN3O00409 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.11■□□□□ 0.17
FOXN3O00409 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXN3O00409 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXN3O00409 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.11■□□□□ 0.17
FOXN3O00409 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.11■□□□□ 0.17
FOXN3O00409 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC16.11■□□□□ 0.17
FOXN3O00409 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXN3O00409 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.11■□□□□ 0.17
FOXN3O00409 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
FOXN3O00409 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FOXN3O00409 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.11■□□□□ 0.17
FOXN3O00409 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXN3O00409 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
FOXN3O00409 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
FOXN3O00409 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXN3O00409 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.1■□□□□ 0.17
FOXN3O00409 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FOXN3O00409 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC16.1■□□□□ 0.17
FOXN3O00409 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXN3O00409 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FOXN3O00409 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXN3O00409 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXN3O00409 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.1■□□□□ 0.17
FOXN3O00409 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.1■□□□□ 0.17
FOXN3O00409 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXN3O00409 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXN3O00409 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC16.1■□□□□ 0.17
FOXN3O00409 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXN3O00409 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXN3O00409 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXN3O00409 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FOXN3O00409 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXN3O00409 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXN3O00409 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.1■□□□□ 0.17
FOXN3O00409 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms