Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 PPP1R14BP2-201ENST00000426284 444 ntBASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 SEC1P-202ENST00000473944 940 ntBASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 AC073195.1-201ENST00000607241 877 ntBASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 AC110285.5-201ENST00000611501 352 ntBASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 GXYLT1P4-201ENST00000613576 1192 ntBASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 AC004263.2-201ENST00000617183 678 ntBASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 MEGF10-201ENST00000274473 7594 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 FRMPD3-201ENST00000276185 7304 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 EHD1-213ENST00000621096 3336 ntTSL 5 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 OCLN-201ENST00000355237 6438 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 AC068760.1-201ENST00000493579 1953 ntBASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 MGLL-205ENST00000453507 4552 ntTSL 2 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 ACP6-205ENST00000583509 6923 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 MST1R-215ENST00000621387 4449 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 ZNF827-201ENST00000379448 4197 ntAPPRIS P3 TSL 2 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 MUC3A-201ENST00000379458 11226 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 TSKU-203ENST00000527881 3554 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 TCOF1-205ENST00000439160 4644 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 ZBED1P1-201ENST00000502364 1930 ntBASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CHKB-CPT1BH3BT56 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 TMEM169-202ENST00000406027 3174 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 FCHSD1-201ENST00000435817 4320 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 PPP6C-202ENST00000415905 4172 ntTSL 2 BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 LOXHD1-207ENST00000441551 6226 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 AC107375.1-201ENST00000564464 2231 ntBASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 CTRC-201ENST00000375943 3147 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 BTBD3-203ENST00000399006 4826 ntAPPRIS ALT1 TSL 5 BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 RIOK3-201ENST00000339486 4038 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 DDR1-238ENST00000446312 3202 ntTSL 5 BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 AL592424.1-201ENST00000563624 1536 ntBASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 PGM2L1-201ENST00000298198 8515 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 USP35-204ENST00000530267 2419 ntTSL 2 BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 MYO5A-213ENST00000613858 12139 ntAPPRIS ALT1 TSL 5 BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 STAT1-201ENST00000361099 4310 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 TOGARAM1-202ENST00000361577 6247 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 KLF6-207ENST00000542957 4537 ntTSL 5 BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 AAGAB-207ENST00000561452 2251 ntTSL 5 BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 DIAPH3-205ENST00000400324 4804 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 HACD1-201ENST00000326961 773 ntTSL 2 BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 AC003669.1-201ENST00000334569 611 ntBASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 GAD2-202ENST00000376248 680 ntTSL 5 BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 KLF4P1-201ENST00000412782 1185 ntBASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CHKB-CPT1BH3BT56 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms