Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 KRT8P12-202ENST00000472924 1397 ntBASIC10.61□□□□□ -0.71
LINC01546A6NGU7 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01546A6NGU7 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 MIR600HG-201ENST00000449175 5984 ntBASIC10.6□□□□□ -0.71
LINC01546A6NGU7 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 AC107375.1-201ENST00000564464 2231 ntBASIC10.6□□□□□ -0.71
LINC01546A6NGU7 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 KRT18P67-201ENST00000432816 1264 ntBASIC10.6□□□□□ -0.71
LINC01546A6NGU7 AF186996.4-201ENST00000467186 377 ntBASIC10.6□□□□□ -0.71
LINC01546A6NGU7 RN7SL589P-201ENST00000481268 310 ntBASIC10.6□□□□□ -0.71
LINC01546A6NGU7 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 BANF1P1-201ENST00000553684 263 ntBASIC10.6□□□□□ -0.71
LINC01546A6NGU7 KRT8P23-201ENST00000560090 1207 ntBASIC10.6□□□□□ -0.71
LINC01546A6NGU7 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 AC010970.1-201ENST00000445125 1848 ntBASIC10.6□□□□□ -0.71
LINC01546A6NGU7 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01546A6NGU7 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 AL022323.5-201ENST00000624101 2059 ntBASIC10.59□□□□□ -0.71
LINC01546A6NGU7 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 AL355306.1-201ENST00000415580 579 ntBASIC10.59□□□□□ -0.71
LINC01546A6NGU7 RPL13P2-201ENST00000440687 659 ntBASIC10.59□□□□□ -0.71
LINC01546A6NGU7 FAM197Y8-203ENST00000450145 560 ntBASIC10.59□□□□□ -0.71
LINC01546A6NGU7 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms