Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SBNO1A3KN83 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC20■□□□□ 0.79
SBNO1A3KN83 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SBNO1A3KN83 HLA-DMA-203ENST00000395305 777 ntBASIC20■□□□□ 0.79
SBNO1A3KN83 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC20■□□□□ 0.79
SBNO1A3KN83 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC20■□□□□ 0.79
SBNO1A3KN83 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC20■□□□□ 0.79
SBNO1A3KN83 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SBNO1A3KN83 RN7SL470P-201ENST00000583069 259 ntBASIC20■□□□□ 0.79
SBNO1A3KN83 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC20■□□□□ 0.79
SBNO1A3KN83 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC20■□□□□ 0.79
SBNO1A3KN83 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SBNO1A3KN83 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SBNO1A3KN83 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SBNO1A3KN83 MARK2P16-201ENST00000605714 1723 ntBASIC20■□□□□ 0.79
SBNO1A3KN83 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SBNO1A3KN83 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SBNO1A3KN83 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
SBNO1A3KN83 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC20■□□□□ 0.79
SBNO1A3KN83 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC20■□□□□ 0.79
SBNO1A3KN83 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SBNO1A3KN83 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC20■□□□□ 0.79
SBNO1A3KN83 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC20■□□□□ 0.79
SBNO1A3KN83 ACE-204ENST00000428043 5120 ntTSL 2 BASIC20■□□□□ 0.79
SBNO1A3KN83 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SBNO1A3KN83 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC20■□□□□ 0.79
SBNO1A3KN83 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC20■□□□□ 0.79
SBNO1A3KN83 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SBNO1A3KN83 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SBNO1A3KN83 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SBNO1A3KN83 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SBNO1A3KN83 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
SBNO1A3KN83 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SBNO1A3KN83 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SBNO1A3KN83 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SBNO1A3KN83 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SBNO1A3KN83 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC19.99■□□□□ 0.79
SBNO1A3KN83 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SBNO1A3KN83 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SBNO1A3KN83 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC19.99■□□□□ 0.79
SBNO1A3KN83 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SBNO1A3KN83 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC19.99■□□□□ 0.79
SBNO1A3KN83 NEU3-207ENST00000534628 746 ntTSL 2 BASIC19.99■□□□□ 0.79
SBNO1A3KN83 MT3-203ENST00000565838 421 ntTSL 3 BASIC19.99■□□□□ 0.79
SBNO1A3KN83 MIR3180-2-201ENST00000581748 88 ntBASIC19.99■□□□□ 0.79
SBNO1A3KN83 RN7SL596P-201ENST00000582123 288 ntBASIC19.99■□□□□ 0.79
SBNO1A3KN83 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC19.99■□□□□ 0.79
SBNO1A3KN83 MVK-217ENST00000639206 367 ntTSL 5 BASIC19.99■□□□□ 0.79
SBNO1A3KN83 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
SBNO1A3KN83 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SBNO1A3KN83 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SBNO1A3KN83 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SBNO1A3KN83 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SBNO1A3KN83 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SBNO1A3KN83 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SBNO1A3KN83 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SBNO1A3KN83 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SBNO1A3KN83 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SBNO1A3KN83 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SBNO1A3KN83 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SBNO1A3KN83 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SBNO1A3KN83 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SBNO1A3KN83 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SBNO1A3KN83 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SBNO1A3KN83 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SBNO1A3KN83 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC19.99■□□□□ 0.79
SBNO1A3KN83 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SBNO1A3KN83 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SBNO1A3KN83 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC19.98■□□□□ 0.79
SBNO1A3KN83 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC19.98■□□□□ 0.79
SBNO1A3KN83 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SBNO1A3KN83 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SBNO1A3KN83 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SBNO1A3KN83 HNRNPA1P27-201ENST00000412087 955 ntBASIC19.98■□□□□ 0.79
SBNO1A3KN83 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC19.98■□□□□ 0.79
SBNO1A3KN83 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC19.98■□□□□ 0.79
SBNO1A3KN83 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC19.98■□□□□ 0.79
SBNO1A3KN83 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC19.98■□□□□ 0.79
SBNO1A3KN83 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC19.98■□□□□ 0.79
SBNO1A3KN83 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC19.98■□□□□ 0.79
SBNO1A3KN83 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC19.98■□□□□ 0.79
SBNO1A3KN83 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC19.98■□□□□ 0.79
SBNO1A3KN83 LINC00431-202ENST00000636375 159 ntBASIC19.98■□□□□ 0.79
SBNO1A3KN83 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SBNO1A3KN83 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC19.98■□□□□ 0.79
SBNO1A3KN83 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SBNO1A3KN83 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
SBNO1A3KN83 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC19.98■□□□□ 0.79
SBNO1A3KN83 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SBNO1A3KN83 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SBNO1A3KN83 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SBNO1A3KN83 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SBNO1A3KN83 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SBNO1A3KN83 AC136621.1-201ENST00000624017 2304 ntBASIC19.98■□□□□ 0.79
SBNO1A3KN83 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC19.98■□□□□ 0.79
SBNO1A3KN83 HLA-DQB1-202ENST00000399079 1501 ntBASIC19.98■□□□□ 0.79
SBNO1A3KN83 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC19.98■□□□□ 0.79
SBNO1A3KN83 AL590440.2-201ENST00000641973 1595 ntBASIC19.97■□□□□ 0.79
SBNO1A3KN83 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SBNO1A3KN83 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms