Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ACE3P-201ENST00000423435 1973 ntBASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 GRK6P1-201ENST00000400595 1711 ntBASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AC022210.1-201ENST00000449856 793 ntBASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PTP4A1P2-201ENST00000546033 454 ntBASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ORC6-206ENST00000568364 888 ntTSL 5 BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AC233724.13-201ENST00000598383 410 ntBASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AL022328.1-201ENST00000610050 478 ntBASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AC018665.1-201ENST00000622927 1362 ntBASIC12.18□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 CICP14-201ENST00000629111 2732 ntBASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AL121723.1-201ENST00000445194 1519 ntBASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 REXO1L2P-201ENST00000425429 2069 ntBASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TCRBV4S1A1TA0A5B7 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms