Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LOC102724428A0A0B4J2F2 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC18.82■□□□□ 0.6
LOC102724428A0A0B4J2F2 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
LOC102724428A0A0B4J2F2 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC18.82■□□□□ 0.6
LOC102724428A0A0B4J2F2 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC18.82■□□□□ 0.6
LOC102724428A0A0B4J2F2 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LOC102724428A0A0B4J2F2 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LOC102724428A0A0B4J2F2 NUDT4P2-201ENST00000578341 546 ntBASIC18.82■□□□□ 0.6
LOC102724428A0A0B4J2F2 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC18.82■□□□□ 0.6
LOC102724428A0A0B4J2F2 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC18.82■□□□□ 0.6
LOC102724428A0A0B4J2F2 AL022334.2-201ENST00000610000 484 ntBASIC18.82■□□□□ 0.6
LOC102724428A0A0B4J2F2 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
LOC102724428A0A0B4J2F2 HLA-DQB1-202ENST00000399079 1501 ntBASIC18.82■□□□□ 0.6
LOC102724428A0A0B4J2F2 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LOC102724428A0A0B4J2F2 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC18.82■□□□□ 0.6
LOC102724428A0A0B4J2F2 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.82■□□□□ 0.6
LOC102724428A0A0B4J2F2 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
LOC102724428A0A0B4J2F2 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LOC102724428A0A0B4J2F2 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.82■□□□□ 0.6
LOC102724428A0A0B4J2F2 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
LOC102724428A0A0B4J2F2 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
LOC102724428A0A0B4J2F2 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
LOC102724428A0A0B4J2F2 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LOC102724428A0A0B4J2F2 F10-203ENST00000409306 1450 ntTSL 3 BASIC18.82■□□□□ 0.6
LOC102724428A0A0B4J2F2 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LOC102724428A0A0B4J2F2 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LOC102724428A0A0B4J2F2 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.82■□□□□ 0.6
LOC102724428A0A0B4J2F2 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC18.82■□□□□ 0.6
LOC102724428A0A0B4J2F2 IL9RP3-201ENST00000442856 1674 ntBASIC18.82■□□□□ 0.6
LOC102724428A0A0B4J2F2 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
LOC102724428A0A0B4J2F2 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LOC102724428A0A0B4J2F2 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LOC102724428A0A0B4J2F2 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LOC102724428A0A0B4J2F2 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 ALG1L6P-201ENST00000515248 758 ntBASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 AP000911.2-201ENST00000534330 502 ntBASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 AC027237.1-201ENST00000560942 655 ntBASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 MT3-203ENST00000565838 421 ntTSL 3 BASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 AC005041.3-201ENST00000606287 649 ntBASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 AL391005.1-201ENST00000623953 2435 ntBASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 MROH4P-201ENST00000431302 1578 ntBASIC18.81■□□□□ 0.6
LOC102724428A0A0B4J2F2 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LOC102724428A0A0B4J2F2 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LOC102724428A0A0B4J2F2 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LOC102724428A0A0B4J2F2 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC18.8■□□□□ 0.6
LOC102724428A0A0B4J2F2 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.8■□□□□ 0.6
LOC102724428A0A0B4J2F2 MARK2P16-201ENST00000605714 1723 ntBASIC18.8■□□□□ 0.6
LOC102724428A0A0B4J2F2 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC18.8■□□□□ 0.6
LOC102724428A0A0B4J2F2 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LOC102724428A0A0B4J2F2 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LOC102724428A0A0B4J2F2 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.8■□□□□ 0.6
LOC102724428A0A0B4J2F2 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LOC102724428A0A0B4J2F2 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LOC102724428A0A0B4J2F2 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LOC102724428A0A0B4J2F2 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.8■□□□□ 0.6
LOC102724428A0A0B4J2F2 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LOC102724428A0A0B4J2F2 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC18.8■□□□□ 0.6
LOC102724428A0A0B4J2F2 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC18.8■□□□□ 0.6
LOC102724428A0A0B4J2F2 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
LOC102724428A0A0B4J2F2 AC023024.2-201ENST00000623561 1993 ntBASIC18.8■□□□□ 0.6
LOC102724428A0A0B4J2F2 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
LOC102724428A0A0B4J2F2 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LOC102724428A0A0B4J2F2 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
LOC102724428A0A0B4J2F2 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LOC102724428A0A0B4J2F2 KRT8P28-201ENST00000433288 1390 ntBASIC18.8■□□□□ 0.6
LOC102724428A0A0B4J2F2 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC18.8■□□□□ 0.6
LOC102724428A0A0B4J2F2 AC020658.6-201ENST00000623564 1870 ntBASIC18.8■□□□□ 0.6
LOC102724428A0A0B4J2F2 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms