Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV6-7A0A0A0MS04 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.65□□□□□ -0.39
TRBV6-7A0A0A0MS04 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC087499.5-201ENST00000452760 1342 ntBASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC016397.2-201ENST00000624848 1985 ntBASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC109322.1-201ENST00000524499 1264 ntBASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 TIMM17BP1-201ENST00000545713 516 ntBASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 SNHG9-202ENST00000564014 471 ntBASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV6-7A0A0A0MS04 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 TUBB3P1-201ENST00000405796 1332 ntBASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 NUTM2HP-201ENST00000442076 2498 ntBASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC069120.2-201ENST00000524091 540 ntBASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC092337.1-201ENST00000568699 1129 ntBASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV6-7A0A0A0MS04 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms