Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB7Q9Y5E2 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB7Q9Y5E2 AC020658.6-201ENST00000623564 1870 ntBASIC16.11■□□□□ 0.17
PCDHB7Q9Y5E2 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHB7Q9Y5E2 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB7Q9Y5E2 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHB7Q9Y5E2 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB7Q9Y5E2 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PCDHB7Q9Y5E2 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB7Q9Y5E2 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB7Q9Y5E2 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB7Q9Y5E2 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHB7Q9Y5E2 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHB7Q9Y5E2 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
PCDHB7Q9Y5E2 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB7Q9Y5E2 SALL4P5-201ENST00000419001 1760 ntBASIC16.1■□□□□ 0.17
PCDHB7Q9Y5E2 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB7Q9Y5E2 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB7Q9Y5E2 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB7Q9Y5E2 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB7Q9Y5E2 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB7Q9Y5E2 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHB7Q9Y5E2 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHB7Q9Y5E2 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB7Q9Y5E2 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB7Q9Y5E2 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB7Q9Y5E2 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB7Q9Y5E2 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHB7Q9Y5E2 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
PCDHB7Q9Y5E2 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHB7Q9Y5E2 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB7Q9Y5E2 MIR33B-201ENST00000385104 96 ntBASIC16.1■□□□□ 0.17
PCDHB7Q9Y5E2 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB7Q9Y5E2 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHB7Q9Y5E2 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
PCDHB7Q9Y5E2 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
PCDHB7Q9Y5E2 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
PCDHB7Q9Y5E2 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB7Q9Y5E2 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHB7Q9Y5E2 AC005962.1-201ENST00000584100 773 ntBASIC16.1■□□□□ 0.17
PCDHB7Q9Y5E2 SPCS2P2-201ENST00000603270 608 ntBASIC16.1■□□□□ 0.17
PCDHB7Q9Y5E2 AC012044.1-201ENST00000603431 297 ntBASIC16.1■□□□□ 0.17
PCDHB7Q9Y5E2 AC027601.3-201ENST00000622907 509 ntBASIC16.1■□□□□ 0.17
PCDHB7Q9Y5E2 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHB7Q9Y5E2 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
PCDHB7Q9Y5E2 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHB7Q9Y5E2 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB7Q9Y5E2 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHB7Q9Y5E2 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB7Q9Y5E2 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB7Q9Y5E2 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB7Q9Y5E2 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PCDHB7Q9Y5E2 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHB7Q9Y5E2 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 AP000845.1-201ENST00000581677 2131 ntBASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 ISCA2P1-201ENST00000425548 448 ntBASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 PARP8-206ENST00000503665 572 ntTSL 4 BASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 SCARNA21-201ENST00000517026 139 ntBASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 RTN3P1-201ENST00000536295 711 ntBASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 MIR6720-201ENST00000611664 98 ntBASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHB7Q9Y5E2 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHB7Q9Y5E2 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.08■□□□□ 0.17
PCDHB7Q9Y5E2 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHB7Q9Y5E2 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
PCDHB7Q9Y5E2 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHB7Q9Y5E2 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHB7Q9Y5E2 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms