Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
FNDC3AQ9Y2H6 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
FNDC3AQ9Y2H6 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FNDC3AQ9Y2H6 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.5■□□□□ 0.07
FNDC3AQ9Y2H6 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
FNDC3AQ9Y2H6 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.5■□□□□ 0.07
FNDC3AQ9Y2H6 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.5■□□□□ 0.07
FNDC3AQ9Y2H6 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.5■□□□□ 0.07
FNDC3AQ9Y2H6 CLUHP6-201ENST00000580789 941 ntBASIC15.5■□□□□ 0.07
FNDC3AQ9Y2H6 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.5■□□□□ 0.07
FNDC3AQ9Y2H6 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
FNDC3AQ9Y2H6 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FNDC3AQ9Y2H6 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FNDC3AQ9Y2H6 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
FNDC3AQ9Y2H6 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
FNDC3AQ9Y2H6 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FNDC3AQ9Y2H6 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FNDC3AQ9Y2H6 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
FNDC3AQ9Y2H6 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
FNDC3AQ9Y2H6 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FNDC3AQ9Y2H6 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.5■□□□□ 0.07
FNDC3AQ9Y2H6 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
FNDC3AQ9Y2H6 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 AC104640.1-201ENST00000562617 2109 ntBASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 BAATP1-201ENST00000412284 1225 ntBASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 AC009486.1-201ENST00000569860 813 ntBASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 AC103810.3-201ENST00000583567 96 ntBASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 AC009542.2-202ENST00000619004 1067 ntBASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
FNDC3AQ9Y2H6 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 AC022532.1-201ENST00000624563 1728 ntBASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 YBX1P6-201ENST00000442962 1002 ntBASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 AC106760.1-201ENST00000508690 800 ntBASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.48■□□□□ 0.07
FNDC3AQ9Y2H6 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms