Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
ERGIC3Q9Y282 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC13.85□□□□□ -0.19
ERGIC3Q9Y282 AC025580.3-201ENST00000617932 1424 ntBASIC13.85□□□□□ -0.19
ERGIC3Q9Y282 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ERGIC3Q9Y282 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ERGIC3Q9Y282 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
ERGIC3Q9Y282 FAM220BP-201ENST00000377689 816 ntBASIC13.85□□□□□ -0.19
ERGIC3Q9Y282 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.85□□□□□ -0.19
ERGIC3Q9Y282 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.85□□□□□ -0.19
ERGIC3Q9Y282 KRT18P67-201ENST00000432816 1264 ntBASIC13.85□□□□□ -0.19
ERGIC3Q9Y282 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ERGIC3Q9Y282 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.85□□□□□ -0.19
ERGIC3Q9Y282 SKP2-204ENST00000508514 821 ntTSL 3 BASIC13.85□□□□□ -0.19
ERGIC3Q9Y282 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ERGIC3Q9Y282 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.85□□□□□ -0.19
ERGIC3Q9Y282 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ERGIC3Q9Y282 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
ERGIC3Q9Y282 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
ERGIC3Q9Y282 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.85□□□□□ -0.19
ERGIC3Q9Y282 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ERGIC3Q9Y282 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
ERGIC3Q9Y282 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ERGIC3Q9Y282 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
ERGIC3Q9Y282 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ERGIC3Q9Y282 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
ERGIC3Q9Y282 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ERGIC3Q9Y282 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.85□□□□□ -0.19
ERGIC3Q9Y282 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.85□□□□□ -0.19
ERGIC3Q9Y282 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
ERGIC3Q9Y282 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 AC002056.1-201ENST00000395613 760 ntBASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 AC004945.1-201ENST00000416738 983 ntBASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 TMEM198B-204ENST00000484016 896 ntBASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
ERGIC3Q9Y282 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
ERGIC3Q9Y282 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.83□□□□□ -0.19
ERGIC3Q9Y282 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.83□□□□□ -0.19
ERGIC3Q9Y282 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
ERGIC3Q9Y282 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
ERGIC3Q9Y282 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
ERGIC3Q9Y282 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
ERGIC3Q9Y282 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
ERGIC3Q9Y282 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
ERGIC3Q9Y282 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
ERGIC3Q9Y282 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ERGIC3Q9Y282 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ERGIC3Q9Y282 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ERGIC3Q9Y282 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ERGIC3Q9Y282 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ERGIC3Q9Y282 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ERGIC3Q9Y282 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms