Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
KCMF1Q9P0J7 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 AC005229.1-201ENST00000392885 409 ntBASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 GPR53P-205ENST00000457298 1084 ntBASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 AC026434.2-201ENST00000506094 1078 ntBASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 BTNL10-201ENST00000595971 695 ntBASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 AC145423.3-201ENST00000615987 467 ntBASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 AC013726.1-201ENST00000563747 2285 ntBASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
KCMF1Q9P0J7 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 LRRC59-203ENST00000576448 1531 ntBASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 AL138709.1-201ENST00000614840 1693 ntBASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 AC092933.1-201ENST00000393644 945 ntBASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 AC023090.2-201ENST00000625182 2110 ntBASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 AC055811.4-201ENST00000624039 1754 ntBASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.31□□□□□ -0.12
KCMF1Q9P0J7 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms