Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 AC134312.5-201ENST00000568031 1313 ntBASIC14.66□□□□□ -0.06
CUEDC1Q9NWM3 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 BAATP1-201ENST00000412284 1225 ntBASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 AC012441.1-201ENST00000446669 685 ntBASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 USP32P1-208ENST00000506594 1164 ntBASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 AC106760.1-201ENST00000508690 800 ntBASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 AC104989.1-201ENST00000519711 778 ntBASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 MTND2P7-201ENST00000521337 640 ntBASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 KRT8P35-201ENST00000483942 1338 ntBASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.65□□□□□ -0.06
CUEDC1Q9NWM3 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.07
CUEDC1Q9NWM3 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 ACTBP8-201ENST00000403258 1108 ntBASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 KRT43P-201ENST00000434019 910 ntBASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 AC114812.1-204ENST00000449669 728 ntBASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 KRT18P25-201ENST00000508931 1278 ntBASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 MIR6775-201ENST00000617557 69 ntBASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms