Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 SPCS2P1-201ENST00000561636 679 ntBASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 AL096865.1-201ENST00000606796 927 ntBASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 AC138969.3-201ENST00000546612 1459 ntBASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 AC138932.2-201ENST00000548268 1459 ntBASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 AC126755.4-201ENST00000549796 1459 ntBASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 AC104457.1-201ENST00000401024 814 ntBASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 KRT18P43-201ENST00000469825 1281 ntBASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 AC018442.1-201ENST00000421439 2061 ntBASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.6□□□□□ -0.39
LIN7CQ9NUP9 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms