Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 GNRHR2-203ENST00000581100 1187 ntBASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 AC068418.2-201ENST00000577309 3703 ntBASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 INTS4P1-203ENST00000641008 3683 ntBASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMC4Q9NTJ3 FOS-202ENST00000535987 1402 ntTSL 2 BASIC19.34■□□□□ 0.69
SMC4Q9NTJ3 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMC4Q9NTJ3 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMC4Q9NTJ3 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SMC4Q9NTJ3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMC4Q9NTJ3 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC19.34■□□□□ 0.69
SMC4Q9NTJ3 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC19.34■□□□□ 0.69
SMC4Q9NTJ3 TP73-213ENST00000604479 1623 ntTSL 5 BASIC19.34■□□□□ 0.69
SMC4Q9NTJ3 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMC4Q9NTJ3 AC005229.1-201ENST00000392885 409 ntBASIC19.34■□□□□ 0.69
SMC4Q9NTJ3 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMC4Q9NTJ3 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMC4Q9NTJ3 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMC4Q9NTJ3 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
SMC4Q9NTJ3 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC19.34■□□□□ 0.69
SMC4Q9NTJ3 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC19.34■□□□□ 0.69
SMC4Q9NTJ3 FO681548.1-201ENST00000455617 1132 ntBASIC19.34■□□□□ 0.69
SMC4Q9NTJ3 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SMC4Q9NTJ3 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC19.34■□□□□ 0.69
SMC4Q9NTJ3 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC19.34■□□□□ 0.69
SMC4Q9NTJ3 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC19.34■□□□□ 0.69
SMC4Q9NTJ3 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMC4Q9NTJ3 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMC4Q9NTJ3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMC4Q9NTJ3 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SMC4Q9NTJ3 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMC4Q9NTJ3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMC4Q9NTJ3 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMC4Q9NTJ3 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC19.34■□□□□ 0.69
SMC4Q9NTJ3 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMC4Q9NTJ3 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC19.34■□□□□ 0.69
SMC4Q9NTJ3 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMC4Q9NTJ3 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC19.34■□□□□ 0.69
SMC4Q9NTJ3 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMC4Q9NTJ3 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMC4Q9NTJ3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC19.33■□□□□ 0.69
SMC4Q9NTJ3 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC19.33■□□□□ 0.69
SMC4Q9NTJ3 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SMC4Q9NTJ3 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SMC4Q9NTJ3 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC19.33■□□□□ 0.69
SMC4Q9NTJ3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMC4Q9NTJ3 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC19.33■□□□□ 0.69
SMC4Q9NTJ3 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SMC4Q9NTJ3 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMC4Q9NTJ3 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMC4Q9NTJ3 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
SMC4Q9NTJ3 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.33■□□□□ 0.68
SMC4Q9NTJ3 KRT17P7-201ENST00000451704 1104 ntBASIC19.33■□□□□ 0.68
SMC4Q9NTJ3 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC19.33■□□□□ 0.68
SMC4Q9NTJ3 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC19.33■□□□□ 0.68
SMC4Q9NTJ3 AC233724.13-201ENST00000598383 410 ntBASIC19.33■□□□□ 0.68
SMC4Q9NTJ3 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC19.33■□□□□ 0.68
SMC4Q9NTJ3 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC19.33■□□□□ 0.68
SMC4Q9NTJ3 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
SMC4Q9NTJ3 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMC4Q9NTJ3 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMC4Q9NTJ3 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SMC4Q9NTJ3 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SMC4Q9NTJ3 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SMC4Q9NTJ3 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMC4Q9NTJ3 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMC4Q9NTJ3 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC19.33■□□□□ 0.68
SMC4Q9NTJ3 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
SMC4Q9NTJ3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
SMC4Q9NTJ3 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMC4Q9NTJ3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC19.32■□□□□ 0.68
SMC4Q9NTJ3 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SMC4Q9NTJ3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMC4Q9NTJ3 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMC4Q9NTJ3 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMC4Q9NTJ3 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC19.32■□□□□ 0.68
SMC4Q9NTJ3 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC19.32■□□□□ 0.68
SMC4Q9NTJ3 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SMC4Q9NTJ3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMC4Q9NTJ3 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
SMC4Q9NTJ3 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMC4Q9NTJ3 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SMC4Q9NTJ3 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SMC4Q9NTJ3 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMC4Q9NTJ3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC19.32■□□□□ 0.68
SMC4Q9NTJ3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms