Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
HMG20AQ9NP66 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HMG20AQ9NP66 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.81□□□□□ -0.2
HMG20AQ9NP66 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HMG20AQ9NP66 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HMG20AQ9NP66 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HMG20AQ9NP66 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HMG20AQ9NP66 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 BNIP3P1-202ENST00000550043 1585 ntBASIC13.8□□□□□ -0.2
HMG20AQ9NP66 KRT8P24-201ENST00000560290 1559 ntBASIC13.8□□□□□ -0.2
HMG20AQ9NP66 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 BEND3P3-201ENST00000611030 2440 ntBASIC13.8□□□□□ -0.2
HMG20AQ9NP66 AC020658.7-201ENST00000624274 2442 ntBASIC13.8□□□□□ -0.2
HMG20AQ9NP66 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 AC018442.1-201ENST00000421439 2061 ntBASIC13.8□□□□□ -0.2
HMG20AQ9NP66 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 AL590627.1-203ENST00000421194 1026 ntBASIC13.8□□□□□ -0.2
HMG20AQ9NP66 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 AL161645.1-201ENST00000622716 1255 ntBASIC13.8□□□□□ -0.2
HMG20AQ9NP66 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 AL118506.1-201ENST00000601296 3082 ntBASIC13.8□□□□□ -0.2
HMG20AQ9NP66 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 ZNF259P1-201ENST00000407656 1365 ntBASIC13.8□□□□□ -0.2
HMG20AQ9NP66 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 CICP16-201ENST00000502609 2813 ntBASIC13.8□□□□□ -0.2
HMG20AQ9NP66 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMG20AQ9NP66 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HMG20AQ9NP66 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.79□□□□□ -0.2
HMG20AQ9NP66 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HMG20AQ9NP66 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
HMG20AQ9NP66 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.79□□□□□ -0.2
HMG20AQ9NP66 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HMG20AQ9NP66 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HMG20AQ9NP66 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
HMG20AQ9NP66 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HMG20AQ9NP66 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.79□□□□□ -0.2
HMG20AQ9NP66 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HMG20AQ9NP66 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
HMG20AQ9NP66 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.79□□□□□ -0.2
HMG20AQ9NP66 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
HMG20AQ9NP66 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HMG20AQ9NP66 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.79□□□□□ -0.2
HMG20AQ9NP66 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HMG20AQ9NP66 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HMG20AQ9NP66 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.79□□□□□ -0.2
HMG20AQ9NP66 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
HMG20AQ9NP66 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
HMG20AQ9NP66 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HMG20AQ9NP66 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
HMG20AQ9NP66 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HMG20AQ9NP66 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HMG20AQ9NP66 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HMG20AQ9NP66 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HMG20AQ9NP66 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.79□□□□□ -0.2
HMG20AQ9NP66 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.79□□□□□ -0.2
HMG20AQ9NP66 FDX1P1-201ENST00000449115 551 ntBASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms