Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 CBL-201ENST00000264033 11231 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 SEMA6D-206ENST00000389428 5874 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 AC055811.4-201ENST00000624039 1754 ntBASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 GPRASP1-201ENST00000361600 5971 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 DGCR9-201ENST00000609630 2415 ntBASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 ARHGAP20-202ENST00000524756 6180 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 AC005521.1-201ENST00000393351 872 ntBASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 HMGA1P7-201ENST00000406908 502 ntBASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 SEC63P1-201ENST00000425785 1258 ntBASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 AC007041.1-201ENST00000438989 1155 ntBASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 PHKG1P2-201ENST00000457537 863 ntBASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 SCARNA2-201ENST00000458748 420 ntBASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 AP000867.3-201ENST00000524675 377 ntBASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 AC022616.7-201ENST00000525383 220 ntBASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 MIR497HG-202ENST00000572453 3838 ntBASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 AP002414.4-201ENST00000589764 1148 ntBASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 MTDHP3-201ENST00000594186 672 ntBASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 AC135178.5-201ENST00000602597 674 ntBASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 AC069148.1-201ENST00000608741 768 ntBASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 AC006011.2-201ENST00000621313 1158 ntBASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC4.1□□□□□ -1.75
LCE3DQ9BYE3 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms