Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 AL133466.1-201ENST00000447582 150 ntBASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 AC020922.3-201ENST00000595064 547 ntBASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 AL109837.1-201ENST00000603272 613 ntBASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 CU633904.3-201ENST00000624042 1029 ntBASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 FRMPD2B-201ENST00000431305 1347 ntBASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 TBC1D3J-201ENST00000620719 1426 ntBASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDK5RAP2Q96SN8 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CDK5RAP2Q96SN8 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDK5RAP2Q96SN8 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDK5RAP2Q96SN8 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDK5RAP2Q96SN8 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CDK5RAP2Q96SN8 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDK5RAP2Q96SN8 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDK5RAP2Q96SN8 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDK5RAP2Q96SN8 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDK5RAP2Q96SN8 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDK5RAP2Q96SN8 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC17.34■□□□□ 0.37
CDK5RAP2Q96SN8 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC17.34■□□□□ 0.37
CDK5RAP2Q96SN8 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
CDK5RAP2Q96SN8 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDK5RAP2Q96SN8 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
CDK5RAP2Q96SN8 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.34■□□□□ 0.37
CDK5RAP2Q96SN8 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
CDK5RAP2Q96SN8 SPCS2P2-201ENST00000603270 608 ntBASIC17.34■□□□□ 0.37
CDK5RAP2Q96SN8 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC17.34■□□□□ 0.37
CDK5RAP2Q96SN8 AC007718.1-201ENST00000621078 280 ntBASIC17.34■□□□□ 0.37
CDK5RAP2Q96SN8 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDK5RAP2Q96SN8 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDK5RAP2Q96SN8 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDK5RAP2Q96SN8 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDK5RAP2Q96SN8 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDK5RAP2Q96SN8 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC17.33■□□□□ 0.37
CDK5RAP2Q96SN8 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDK5RAP2Q96SN8 AL035414.1-201ENST00000451327 857 ntBASIC17.33■□□□□ 0.37
CDK5RAP2Q96SN8 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC17.33■□□□□ 0.37
CDK5RAP2Q96SN8 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDK5RAP2Q96SN8 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDK5RAP2Q96SN8 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CDK5RAP2Q96SN8 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
CDK5RAP2Q96SN8 AC012044.1-201ENST00000603431 297 ntBASIC17.33■□□□□ 0.37
CDK5RAP2Q96SN8 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC17.33■□□□□ 0.37
CDK5RAP2Q96SN8 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDK5RAP2Q96SN8 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC17.33■□□□□ 0.37
CDK5RAP2Q96SN8 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.33■□□□□ 0.37
CDK5RAP2Q96SN8 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.33■□□□□ 0.37
CDK5RAP2Q96SN8 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDK5RAP2Q96SN8 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CDK5RAP2Q96SN8 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
CDK5RAP2Q96SN8 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
CDK5RAP2Q96SN8 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDK5RAP2Q96SN8 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDK5RAP2Q96SN8 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDK5RAP2Q96SN8 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDK5RAP2Q96SN8 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CDK5RAP2Q96SN8 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDK5RAP2Q96SN8 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC17.33■□□□□ 0.36
CDK5RAP2Q96SN8 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDK5RAP2Q96SN8 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC17.33■□□□□ 0.36
CDK5RAP2Q96SN8 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
CDK5RAP2Q96SN8 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC17.33■□□□□ 0.36
CDK5RAP2Q96SN8 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC17.33■□□□□ 0.36
CDK5RAP2Q96SN8 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDK5RAP2Q96SN8 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.33■□□□□ 0.36
CDK5RAP2Q96SN8 AC092506.1-202ENST00000401022 528 ntBASIC17.33■□□□□ 0.36
CDK5RAP2Q96SN8 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDK5RAP2Q96SN8 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC17.33■□□□□ 0.36
CDK5RAP2Q96SN8 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC17.33■□□□□ 0.36
CDK5RAP2Q96SN8 COG4-212ENST00000564653 590 ntTSL 5 BASIC17.33■□□□□ 0.36
CDK5RAP2Q96SN8 NAT9-211ENST00000580632 799 ntTSL 3 BASIC17.33■□□□□ 0.36
CDK5RAP2Q96SN8 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC17.33■□□□□ 0.36
CDK5RAP2Q96SN8 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CDK5RAP2Q96SN8 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC17.33■□□□□ 0.36
CDK5RAP2Q96SN8 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDK5RAP2Q96SN8 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.33■□□□□ 0.36
CDK5RAP2Q96SN8 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDK5RAP2Q96SN8 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDK5RAP2Q96SN8 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC17.32■□□□□ 0.36
CDK5RAP2Q96SN8 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CDK5RAP2Q96SN8 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CDK5RAP2Q96SN8 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDK5RAP2Q96SN8 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDK5RAP2Q96SN8 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDK5RAP2Q96SN8 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDK5RAP2Q96SN8 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CDK5RAP2Q96SN8 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms