Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC4.39□□□□□ -1.71
HMCN1Q96RW7 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC4.39□□□□□ -1.71
HMCN1Q96RW7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HMCN1Q96RW7 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 OR2C1-201ENST00000304936 1406 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 AC023590.1-202ENST00000366457 781 ntTSL 3 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 GEMIN8-203ENST00000398355 1119 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 LINP1-201ENST00000417112 917 ntTSL 2 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 PGAP2-219ENST00000479072 894 ntTSL 3 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 GPR79-201ENST00000498175 868 ntBASIC4.38□□□□□ -1.71
HMCN1Q96RW7 AC121757.1-201ENST00000552441 624 ntTSL 5 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 AC116914.2-201ENST00000571741 291 ntTSL 5 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 MED11-203ENST00000575284 652 ntTSL 3 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 BRD7P5-201ENST00000299197 1822 ntBASIC4.38□□□□□ -1.71
HMCN1Q96RW7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 AC234771.1-201ENST00000416873 250 ntTSL 2 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 HAX1-204ENST00000457918 914 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 PRAMEF35P-201ENST00000458709 891 ntBASIC4.38□□□□□ -1.71
HMCN1Q96RW7 RN7SL47P-201ENST00000488710 299 ntBASIC4.38□□□□□ -1.71
HMCN1Q96RW7 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 ABCD3-201ENST00000315713 884 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 AL391903.1-201ENST00000407513 365 ntBASIC4.38□□□□□ -1.71
HMCN1Q96RW7 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 AC005154.1-217ENST00000584199 581 ntTSL 4 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 FAAP24-205ENST00000590281 865 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 Metazoa_SRP.82-201ENST00000611637 265 ntBASIC4.38□□□□□ -1.71
HMCN1Q96RW7 Metazoa_SRP.152-201ENST00000614413 286 ntBASIC4.38□□□□□ -1.71
HMCN1Q96RW7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 AC002350.2-201ENST00000623894 1828 ntBASIC4.38□□□□□ -1.71
HMCN1Q96RW7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 AC009113.1-201ENST00000570267 2443 ntBASIC4.38□□□□□ -1.71
HMCN1Q96RW7 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 AC103702.1-201ENST00000548801 2630 ntBASIC4.38□□□□□ -1.71
HMCN1Q96RW7 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 Z95114.2-201ENST00000623490 2205 ntBASIC4.38□□□□□ -1.71
HMCN1Q96RW7 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMCN1Q96RW7 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms