Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 AC007952.4-201ENST00000573866 637 ntBASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 CYP4F23P-201ENST00000593402 1579 ntBASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 MTHFR-217ENST00000641820 1569 ntBASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 RN7SKP109-201ENST00000410592 316 ntBASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 RNLS-203ENST00000437752 525 ntTSL 2 BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 AC012441.2-201ENST00000444843 739 ntBASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 HLA-DMA-203ENST00000395305 777 ntBASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 AC110057.1-201ENST00000636031 898 ntBASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CSMD1Q96PZ7 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CSMD1Q96PZ7 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CSMD1Q96PZ7 AC105250.1-201ENST00000509378 2057 ntBASIC12.52□□□□□ -0.4
CSMD1Q96PZ7 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CSMD1Q96PZ7 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
CSMD1Q96PZ7 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
CSMD1Q96PZ7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CSMD1Q96PZ7 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC12.52□□□□□ -0.4
CSMD1Q96PZ7 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
CSMD1Q96PZ7 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
CSMD1Q96PZ7 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.4
CSMD1Q96PZ7 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC12.52□□□□□ -0.4
CSMD1Q96PZ7 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CSMD1Q96PZ7 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC12.52□□□□□ -0.4
CSMD1Q96PZ7 AC006122.1-201ENST00000493323 440 ntBASIC12.52□□□□□ -0.4
CSMD1Q96PZ7 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CSMD1Q96PZ7 GOLGA2P7-209ENST00000560408 745 ntBASIC12.52□□□□□ -0.4
CSMD1Q96PZ7 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC12.52□□□□□ -0.4
CSMD1Q96PZ7 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
CSMD1Q96PZ7 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CSMD1Q96PZ7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
CSMD1Q96PZ7 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CSMD1Q96PZ7 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.41
CSMD1Q96PZ7 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC12.52□□□□□ -0.41
CSMD1Q96PZ7 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
CSMD1Q96PZ7 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CSMD1Q96PZ7 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CSMD1Q96PZ7 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.52□□□□□ -0.41
CSMD1Q96PZ7 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CSMD1Q96PZ7 AC046158.3-201ENST00000624947 2558 ntBASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms