Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 AC138035.3-201ENST00000622706 2791 ntBASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 CRCP-204ENST00000398684 492 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 KRTAP19-9P-201ENST00000421795 191 ntBASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 KLK3-207ENST00000595952 969 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC85AQ96PX6 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 AC073347.1-201ENST00000421633 2643 ntBASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 AC005740.2-201ENST00000511085 419 ntBASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 AL162426.1-201ENST00000624141 743 ntBASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 AC004899.1-201ENST00000424687 1714 ntBASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 TMBIM7P-203ENST00000641617 1718 ntBASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 AC013726.1-201ENST00000563747 2285 ntBASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CCDC85AQ96PX6 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 AC105917.1-201ENST00000506637 2539 ntBASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 SHC1P1-201ENST00000425230 1745 ntBASIC18.61■□□□□ 0.57
CCDC85AQ96PX6 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms