Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC20.92■□□□□ 0.94
USP47Q96K76 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC20.92■□□□□ 0.94
USP47Q96K76 MIR6869-201ENST00000619434 62 ntBASIC20.92■□□□□ 0.94
USP47Q96K76 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP47Q96K76 AL390755.1-201ENST00000623716 2027 ntBASIC20.92■□□□□ 0.94
USP47Q96K76 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP47Q96K76 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP47Q96K76 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP47Q96K76 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP47Q96K76 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
USP47Q96K76 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
USP47Q96K76 AL354702.1-201ENST00000442006 1960 ntBASIC20.92■□□□□ 0.94
USP47Q96K76 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP47Q96K76 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP47Q96K76 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC20.91■□□□□ 0.94
USP47Q96K76 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
USP47Q96K76 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP47Q96K76 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
USP47Q96K76 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
USP47Q96K76 AL136172.1-201ENST00000598590 1394 ntBASIC20.91■□□□□ 0.94
USP47Q96K76 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
USP47Q96K76 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP47Q96K76 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
USP47Q96K76 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP47Q96K76 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
USP47Q96K76 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP47Q96K76 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC20.91■□□□□ 0.94
USP47Q96K76 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC20.91■□□□□ 0.94
USP47Q96K76 PUDPP3-201ENST00000445368 636 ntBASIC20.91■□□□□ 0.94
USP47Q96K76 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
USP47Q96K76 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC20.91■□□□□ 0.94
USP47Q96K76 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC20.91■□□□□ 0.94
USP47Q96K76 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC20.91■□□□□ 0.94
USP47Q96K76 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC20.91■□□□□ 0.94
USP47Q96K76 AC009955.4-201ENST00000597192 544 ntBASIC20.91■□□□□ 0.94
USP47Q96K76 KLK3-211ENST00000597483 810 ntTSL 2 BASIC20.91■□□□□ 0.94
USP47Q96K76 AL096828.3-201ENST00000615354 462 ntBASIC20.91■□□□□ 0.94
USP47Q96K76 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
USP47Q96K76 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP47Q96K76 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC20.91■□□□□ 0.94
USP47Q96K76 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
USP47Q96K76 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP47Q96K76 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
USP47Q96K76 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP47Q96K76 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP47Q96K76 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP47Q96K76 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP47Q96K76 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC20.91■□□□□ 0.94
USP47Q96K76 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC20.91■□□□□ 0.94
USP47Q96K76 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC20.91■□□□□ 0.94
USP47Q96K76 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP47Q96K76 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP47Q96K76 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC20.9■□□□□ 0.94
USP47Q96K76 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
USP47Q96K76 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP47Q96K76 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC20.9■□□□□ 0.94
USP47Q96K76 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
USP47Q96K76 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP47Q96K76 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP47Q96K76 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
USP47Q96K76 AC015818.8-201ENST00000587907 1519 ntBASIC20.9■□□□□ 0.94
USP47Q96K76 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC20.9■□□□□ 0.94
USP47Q96K76 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC20.9■□□□□ 0.94
USP47Q96K76 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC20.9■□□□□ 0.94
USP47Q96K76 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC20.9■□□□□ 0.94
USP47Q96K76 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC20.9■□□□□ 0.94
USP47Q96K76 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC20.9■□□□□ 0.94
USP47Q96K76 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC20.9■□□□□ 0.94
USP47Q96K76 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC20.9■□□□□ 0.94
USP47Q96K76 AL136301.1-201ENST00000615830 422 ntBASIC20.9■□□□□ 0.94
USP47Q96K76 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC20.9■□□□□ 0.94
USP47Q96K76 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
USP47Q96K76 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC20.9■□□□□ 0.94
USP47Q96K76 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP47Q96K76 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
USP47Q96K76 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP47Q96K76 MRPL37P1-201ENST00000592451 1337 ntBASIC20.9■□□□□ 0.94
USP47Q96K76 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP47Q96K76 SHC1P1-201ENST00000425230 1745 ntBASIC20.9■□□□□ 0.94
USP47Q96K76 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP47Q96K76 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
USP47Q96K76 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP47Q96K76 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
USP47Q96K76 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC20.89■□□□□ 0.94
USP47Q96K76 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
USP47Q96K76 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
USP47Q96K76 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
USP47Q96K76 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
USP47Q96K76 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
USP47Q96K76 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
USP47Q96K76 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC20.89■□□□□ 0.93
USP47Q96K76 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC20.89■□□□□ 0.93
USP47Q96K76 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
USP47Q96K76 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
USP47Q96K76 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
USP47Q96K76 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
USP47Q96K76 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC20.89■□□□□ 0.93
USP47Q96K76 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
USP47Q96K76 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP47Q96K76 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms