Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 TOMM22P5-201ENST00000416399 439 ntBASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 Z92544.3-201ENST00000624747 417 ntBASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 AC152010.1-201ENST00000415779 2006 ntBASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FOXRED1Q96CU9 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 KLF2P3-201ENST00000451977 1087 ntBASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 SAMD11P1-201ENST00000571429 661 ntBASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms