Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.57□□□□□ -0.08
VPS33AQ96AX1 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 SAMD11P1-201ENST00000571429 661 ntBASIC14.56□□□□□ -0.08
VPS33AQ96AX1 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.56□□□□□ -0.08
VPS33AQ96AX1 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.56□□□□□ -0.08
VPS33AQ96AX1 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
VPS33AQ96AX1 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.55□□□□□ -0.08
VPS33AQ96AX1 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 AC112482.1-201ENST00000492080 688 ntBASIC14.55□□□□□ -0.08
VPS33AQ96AX1 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 AC074044.1-201ENST00000609673 707 ntBASIC14.55□□□□□ -0.08
VPS33AQ96AX1 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 AL109936.8-201ENST00000641772 604 ntBASIC14.55□□□□□ -0.08
VPS33AQ96AX1 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VPS33AQ96AX1 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms