Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HPS1Q92902 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
HPS1Q92902 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HPS1Q92902 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HPS1Q92902 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.98□□□□□ -0.17
HPS1Q92902 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HPS1Q92902 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HPS1Q92902 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
HPS1Q92902 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
HPS1Q92902 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HPS1Q92902 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.98□□□□□ -0.17
HPS1Q92902 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC13.98□□□□□ -0.17
HPS1Q92902 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.98□□□□□ -0.17
HPS1Q92902 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.98□□□□□ -0.17
HPS1Q92902 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.98□□□□□ -0.17
HPS1Q92902 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HPS1Q92902 AC069262.1-201ENST00000539058 672 ntBASIC13.98□□□□□ -0.17
HPS1Q92902 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.98□□□□□ -0.17
HPS1Q92902 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.98□□□□□ -0.17
HPS1Q92902 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
HPS1Q92902 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.98□□□□□ -0.17
HPS1Q92902 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
HPS1Q92902 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HPS1Q92902 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HPS1Q92902 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
HPS1Q92902 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
HPS1Q92902 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
HPS1Q92902 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
HPS1Q92902 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
HPS1Q92902 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
HPS1Q92902 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HPS1Q92902 AL512652.2-201ENST00000625156 1716 ntBASIC13.98□□□□□ -0.17
HPS1Q92902 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.98□□□□□ -0.17
HPS1Q92902 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HPS1Q92902 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.98□□□□□ -0.17
HPS1Q92902 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HPS1Q92902 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
HPS1Q92902 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
HPS1Q92902 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
HPS1Q92902 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
HPS1Q92902 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
HPS1Q92902 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HPS1Q92902 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.97□□□□□ -0.17
HPS1Q92902 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
HPS1Q92902 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.97□□□□□ -0.17
HPS1Q92902 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
HPS1Q92902 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
HPS1Q92902 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HPS1Q92902 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HPS1Q92902 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.97□□□□□ -0.17
HPS1Q92902 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HPS1Q92902 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HPS1Q92902 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
HPS1Q92902 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
HPS1Q92902 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.97□□□□□ -0.17
HPS1Q92902 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HPS1Q92902 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
HPS1Q92902 SPCS2P4-201ENST00000436160 681 ntBASIC13.97□□□□□ -0.17
HPS1Q92902 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HPS1Q92902 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC13.97□□□□□ -0.17
HPS1Q92902 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
HPS1Q92902 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.97□□□□□ -0.17
HPS1Q92902 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HPS1Q92902 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.97□□□□□ -0.17
HPS1Q92902 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.97□□□□□ -0.17
HPS1Q92902 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.97□□□□□ -0.17
HPS1Q92902 AL365223.1-201ENST00000574864 1297 ntBASIC13.97□□□□□ -0.17
HPS1Q92902 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
HPS1Q92902 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.97□□□□□ -0.17
HPS1Q92902 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HPS1Q92902 AJ011932.1-201ENST00000621707 465 ntBASIC13.97□□□□□ -0.17
HPS1Q92902 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.97□□□□□ -0.17
HPS1Q92902 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.97□□□□□ -0.17
HPS1Q92902 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HPS1Q92902 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HPS1Q92902 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HPS1Q92902 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.97□□□□□ -0.17
HPS1Q92902 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.97□□□□□ -0.17
HPS1Q92902 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
HPS1Q92902 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.97□□□□□ -0.17
HPS1Q92902 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.97□□□□□ -0.17
HPS1Q92902 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
HPS1Q92902 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.97□□□□□ -0.17
HPS1Q92902 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HPS1Q92902 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
HPS1Q92902 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.97□□□□□ -0.17
HPS1Q92902 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HPS1Q92902 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HPS1Q92902 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HPS1Q92902 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.97□□□□□ -0.17
HPS1Q92902 AL031731.1-201ENST00000642131 2094 ntBASIC13.97□□□□□ -0.17
HPS1Q92902 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HPS1Q92902 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HPS1Q92902 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HPS1Q92902 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
HPS1Q92902 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
HPS1Q92902 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HPS1Q92902 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HPS1Q92902 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.96□□□□□ -0.17
HPS1Q92902 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms