Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SHC3Q92529 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
SHC3Q92529 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
SHC3Q92529 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.03■□□□□ 0.16
SHC3Q92529 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.03■□□□□ 0.16
SHC3Q92529 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SHC3Q92529 GNRHR2-203ENST00000581100 1187 ntBASIC16.03■□□□□ 0.16
SHC3Q92529 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHC3Q92529 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.03■□□□□ 0.16
SHC3Q92529 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SHC3Q92529 AC138696.2-201ENST00000607376 223 ntBASIC16.03■□□□□ 0.16
SHC3Q92529 ENPP7P14-201ENST00000621765 1040 ntBASIC16.03■□□□□ 0.16
SHC3Q92529 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SHC3Q92529 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHC3Q92529 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHC3Q92529 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHC3Q92529 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.03■□□□□ 0.16
SHC3Q92529 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHC3Q92529 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHC3Q92529 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHC3Q92529 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.03■□□□□ 0.16
SHC3Q92529 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHC3Q92529 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SHC3Q92529 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHC3Q92529 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SHC3Q92529 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHC3Q92529 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
SHC3Q92529 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
SHC3Q92529 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHC3Q92529 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SHC3Q92529 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SHC3Q92529 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SHC3Q92529 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHC3Q92529 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHC3Q92529 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
SHC3Q92529 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHC3Q92529 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHC3Q92529 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.02■□□□□ 0.16
SHC3Q92529 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHC3Q92529 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHC3Q92529 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SHC3Q92529 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHC3Q92529 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.02■□□□□ 0.16
SHC3Q92529 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.02■□□□□ 0.16
SHC3Q92529 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.02■□□□□ 0.16
SHC3Q92529 AC007389.4-201ENST00000454674 793 ntBASIC16.02■□□□□ 0.16
SHC3Q92529 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.02■□□□□ 0.16
SHC3Q92529 RN7SL692P-201ENST00000464677 288 ntBASIC16.02■□□□□ 0.16
SHC3Q92529 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.02■□□□□ 0.16
SHC3Q92529 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.02■□□□□ 0.16
SHC3Q92529 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.02■□□□□ 0.16
SHC3Q92529 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
SHC3Q92529 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
SHC3Q92529 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.02■□□□□ 0.16
SHC3Q92529 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.02■□□□□ 0.16
SHC3Q92529 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.02■□□□□ 0.16
SHC3Q92529 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.02■□□□□ 0.16
SHC3Q92529 AL596325.1-201ENST00000563991 1082 ntBASIC16.02■□□□□ 0.16
SHC3Q92529 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.02■□□□□ 0.16
SHC3Q92529 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.02■□□□□ 0.16
SHC3Q92529 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.02■□□□□ 0.16
SHC3Q92529 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SHC3Q92529 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
SHC3Q92529 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SHC3Q92529 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SHC3Q92529 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
SHC3Q92529 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SHC3Q92529 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
SHC3Q92529 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SHC3Q92529 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SHC3Q92529 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.02■□□□□ 0.15
SHC3Q92529 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
SHC3Q92529 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.02■□□□□ 0.15
SHC3Q92529 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SHC3Q92529 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SHC3Q92529 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
SHC3Q92529 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHC3Q92529 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.01■□□□□ 0.15
SHC3Q92529 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SHC3Q92529 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SHC3Q92529 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHC3Q92529 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHC3Q92529 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SHC3Q92529 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHC3Q92529 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
SHC3Q92529 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHC3Q92529 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHC3Q92529 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SHC3Q92529 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHC3Q92529 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHC3Q92529 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SHC3Q92529 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.01■□□□□ 0.15
SHC3Q92529 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SHC3Q92529 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SHC3Q92529 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHC3Q92529 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
SHC3Q92529 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SHC3Q92529 AC005229.1-201ENST00000392885 409 ntBASIC16.01■□□□□ 0.15
SHC3Q92529 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SHC3Q92529 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms