Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
COMMD1Q8N668 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.64□□□□□ -0.39
COMMD1Q8N668 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
COMMD1Q8N668 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC12.64□□□□□ -0.39
COMMD1Q8N668 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
COMMD1Q8N668 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COMMD1Q8N668 SPDYE17-201ENST00000412399 783 ntBASIC12.64□□□□□ -0.39
COMMD1Q8N668 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
COMMD1Q8N668 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
COMMD1Q8N668 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC12.64□□□□□ -0.39
COMMD1Q8N668 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC12.64□□□□□ -0.39
COMMD1Q8N668 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC12.64□□□□□ -0.39
COMMD1Q8N668 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
COMMD1Q8N668 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.64□□□□□ -0.39
COMMD1Q8N668 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC12.64□□□□□ -0.39
COMMD1Q8N668 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC12.64□□□□□ -0.39
COMMD1Q8N668 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC12.64□□□□□ -0.39
COMMD1Q8N668 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC12.64□□□□□ -0.39
COMMD1Q8N668 AC009118.2-201ENST00000613275 655 ntBASIC12.64□□□□□ -0.39
COMMD1Q8N668 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COMMD1Q8N668 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
COMMD1Q8N668 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COMMD1Q8N668 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
COMMD1Q8N668 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
COMMD1Q8N668 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
COMMD1Q8N668 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
COMMD1Q8N668 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
COMMD1Q8N668 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
COMMD1Q8N668 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC12.64□□□□□ -0.39
COMMD1Q8N668 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.64□□□□□ -0.39
COMMD1Q8N668 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COMMD1Q8N668 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
COMMD1Q8N668 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COMMD1Q8N668 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
COMMD1Q8N668 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
COMMD1Q8N668 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.64□□□□□ -0.39
COMMD1Q8N668 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
COMMD1Q8N668 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.64□□□□□ -0.39
COMMD1Q8N668 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.64□□□□□ -0.39
COMMD1Q8N668 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COMMD1Q8N668 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
COMMD1Q8N668 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
COMMD1Q8N668 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
COMMD1Q8N668 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COMMD1Q8N668 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC12.63□□□□□ -0.39
COMMD1Q8N668 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC12.63□□□□□ -0.39
COMMD1Q8N668 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.63□□□□□ -0.39
COMMD1Q8N668 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COMMD1Q8N668 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
COMMD1Q8N668 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.63□□□□□ -0.39
COMMD1Q8N668 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.63□□□□□ -0.39
COMMD1Q8N668 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
COMMD1Q8N668 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COMMD1Q8N668 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COMMD1Q8N668 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.63□□□□□ -0.39
COMMD1Q8N668 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COMMD1Q8N668 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COMMD1Q8N668 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COMMD1Q8N668 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC12.63□□□□□ -0.39
COMMD1Q8N668 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.63□□□□□ -0.39
COMMD1Q8N668 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
COMMD1Q8N668 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COMMD1Q8N668 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.63□□□□□ -0.39
COMMD1Q8N668 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COMMD1Q8N668 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC12.63□□□□□ -0.39
COMMD1Q8N668 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
COMMD1Q8N668 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COMMD1Q8N668 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COMMD1Q8N668 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COMMD1Q8N668 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC12.63□□□□□ -0.39
COMMD1Q8N668 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.63□□□□□ -0.39
COMMD1Q8N668 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COMMD1Q8N668 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC12.63□□□□□ -0.39
COMMD1Q8N668 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COMMD1Q8N668 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COMMD1Q8N668 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.63□□□□□ -0.39
COMMD1Q8N668 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC12.63□□□□□ -0.39
COMMD1Q8N668 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.63□□□□□ -0.39
COMMD1Q8N668 MIR4745-201ENST00000577608 62 ntBASIC12.63□□□□□ -0.39
COMMD1Q8N668 AL133215.2-201ENST00000609242 977 ntBASIC12.63□□□□□ -0.39
COMMD1Q8N668 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.63□□□□□ -0.39
COMMD1Q8N668 MIR6069-201ENST00000620069 79 ntBASIC12.63□□□□□ -0.39
COMMD1Q8N668 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.63□□□□□ -0.39
COMMD1Q8N668 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
COMMD1Q8N668 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.63□□□□□ -0.39
COMMD1Q8N668 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COMMD1Q8N668 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
COMMD1Q8N668 AP001282.1-201ENST00000531301 1499 ntBASIC12.63□□□□□ -0.39
COMMD1Q8N668 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COMMD1Q8N668 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COMMD1Q8N668 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.63□□□□□ -0.39
COMMD1Q8N668 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COMMD1Q8N668 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
COMMD1Q8N668 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
COMMD1Q8N668 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
COMMD1Q8N668 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.63□□□□□ -0.39
COMMD1Q8N668 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.63□□□□□ -0.39
COMMD1Q8N668 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.63□□□□□ -0.39
COMMD1Q8N668 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.63□□□□□ -0.39
COMMD1Q8N668 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms