Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 AC015656.1-201ENST00000624209 3578 ntBASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 DGCR5-201ENST00000399539 862 ntBASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 WASH4P-201ENST00000564273 1246 ntBASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 PRSS30P-206ENST00000641773 873 ntBASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 AC114812.1-204ENST00000449669 728 ntBASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 ENPP7P5-201ENST00000541031 1031 ntBASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 CU634019.7-201ENST00000624153 1185 ntBASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 FP236241.2-201ENST00000624906 1185 ntBASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 LINC00552-201ENST00000625151 2579 ntBASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 AL033527.5-201ENST00000641382 801 ntBASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC116Q8IYX3 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms