Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.88□□□□□ -0.03
TRIM48Q8IWZ4 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.88□□□□□ -0.03
TRIM48Q8IWZ4 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.88□□□□□ -0.03
TRIM48Q8IWZ4 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.88□□□□□ -0.03
TRIM48Q8IWZ4 MIR4259-201ENST00000584466 101 ntBASIC14.88□□□□□ -0.03
TRIM48Q8IWZ4 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.88□□□□□ -0.03
TRIM48Q8IWZ4 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TRIM48Q8IWZ4 AC138951.2-201ENST00000623455 1161 ntBASIC14.88□□□□□ -0.03
TRIM48Q8IWZ4 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.88□□□□□ -0.03
TRIM48Q8IWZ4 SNX18-202ENST00000343017 3140 ntBASIC14.88□□□□□ -0.03
TRIM48Q8IWZ4 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.88□□□□□ -0.03
TRIM48Q8IWZ4 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM48Q8IWZ4 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.88□□□□□ -0.03
TRIM48Q8IWZ4 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM48Q8IWZ4 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM48Q8IWZ4 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM48Q8IWZ4 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM48Q8IWZ4 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.88□□□□□ -0.03
TRIM48Q8IWZ4 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.88□□□□□ -0.03
TRIM48Q8IWZ4 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM48Q8IWZ4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM48Q8IWZ4 AC067750.1-201ENST00000608826 6545 ntBASIC14.88□□□□□ -0.03
TRIM48Q8IWZ4 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.88□□□□□ -0.03
TRIM48Q8IWZ4 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM48Q8IWZ4 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 KRT8P14-201ENST00000414254 1442 ntBASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 TPM3P8-201ENST00000330554 643 ntBASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 FAM21FP-201ENST00000426241 1131 ntBASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 AC119751.2-201ENST00000504529 210 ntBASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 AP000812.2-201ENST00000538934 718 ntBASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 GNRHR2-203ENST00000581100 1187 ntBASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 PRSS30P-206ENST00000641773 873 ntBASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 AC148477.4-201ENST00000613430 1793 ntBASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM48Q8IWZ4 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM48Q8IWZ4 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM48Q8IWZ4 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.86□□□□□ -0.03
TRIM48Q8IWZ4 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM48Q8IWZ4 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM48Q8IWZ4 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM48Q8IWZ4 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TRIM48Q8IWZ4 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM48Q8IWZ4 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM48Q8IWZ4 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM48Q8IWZ4 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM48Q8IWZ4 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TRIM48Q8IWZ4 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM48Q8IWZ4 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TRIM48Q8IWZ4 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM48Q8IWZ4 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM48Q8IWZ4 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TRIM48Q8IWZ4 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TRIM48Q8IWZ4 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TRIM48Q8IWZ4 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.86□□□□□ -0.03
TRIM48Q8IWZ4 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM48Q8IWZ4 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.86□□□□□ -0.03
TRIM48Q8IWZ4 HLA-V-201ENST00000429037 534 ntBASIC14.86□□□□□ -0.03
TRIM48Q8IWZ4 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.86□□□□□ -0.03
TRIM48Q8IWZ4 BNIP3P42-201ENST00000454982 569 ntBASIC14.86□□□□□ -0.03
TRIM48Q8IWZ4 FO681548.1-201ENST00000455617 1132 ntBASIC14.86□□□□□ -0.03
TRIM48Q8IWZ4 AC022616.1-201ENST00000518688 554 ntBASIC14.86□□□□□ -0.03
TRIM48Q8IWZ4 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.86□□□□□ -0.03
TRIM48Q8IWZ4 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.86□□□□□ -0.03
TRIM48Q8IWZ4 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms