Protein–RNA interactions for Protein: Q86WV1

SKAP1, Src kinase-associated phosphoprotein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP1Q86WV1 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SKAP1Q86WV1 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SKAP1Q86WV1 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC18.82■□□□□ 0.6
SKAP1Q86WV1 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SKAP1Q86WV1 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SKAP1Q86WV1 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.82■□□□□ 0.6
SKAP1Q86WV1 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SKAP1Q86WV1 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SKAP1Q86WV1 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
SKAP1Q86WV1 AC005014.1-201ENST00000432006 2976 ntBASIC18.82■□□□□ 0.6
SKAP1Q86WV1 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SKAP1Q86WV1 AC087499.5-201ENST00000452760 1342 ntBASIC18.82■□□□□ 0.6
SKAP1Q86WV1 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SKAP1Q86WV1 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SKAP1Q86WV1 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.82■□□□□ 0.6
SKAP1Q86WV1 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.82■□□□□ 0.6
SKAP1Q86WV1 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.82■□□□□ 0.6
SKAP1Q86WV1 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC18.82■□□□□ 0.6
SKAP1Q86WV1 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.82■□□□□ 0.6
SKAP1Q86WV1 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC18.82■□□□□ 0.6
SKAP1Q86WV1 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC18.82■□□□□ 0.6
SKAP1Q86WV1 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.82■□□□□ 0.6
SKAP1Q86WV1 SNHG9-202ENST00000564014 471 ntBASIC18.82■□□□□ 0.6
SKAP1Q86WV1 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SKAP1Q86WV1 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.82■□□□□ 0.6
SKAP1Q86WV1 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SKAP1Q86WV1 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SKAP1Q86WV1 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SKAP1Q86WV1 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SKAP1Q86WV1 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SKAP1Q86WV1 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SKAP1Q86WV1 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SKAP1Q86WV1 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SKAP1Q86WV1 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC18.82■□□□□ 0.6
SKAP1Q86WV1 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SKAP1Q86WV1 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SKAP1Q86WV1 DRD5P1-201ENST00000456605 1438 ntBASIC18.82■□□□□ 0.6
SKAP1Q86WV1 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
SKAP1Q86WV1 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SKAP1Q86WV1 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC18.82■□□□□ 0.6
SKAP1Q86WV1 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.82■□□□□ 0.6
SKAP1Q86WV1 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SKAP1Q86WV1 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SKAP1Q86WV1 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SKAP1Q86WV1 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SKAP1Q86WV1 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.81■□□□□ 0.6
SKAP1Q86WV1 AC093525.8-201ENST00000624099 1342 ntBASIC18.81■□□□□ 0.6
SKAP1Q86WV1 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SKAP1Q86WV1 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SKAP1Q86WV1 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SKAP1Q86WV1 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SKAP1Q86WV1 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC18.81■□□□□ 0.6
SKAP1Q86WV1 ARHGAP23P1-201ENST00000562773 1937 ntBASIC18.81■□□□□ 0.6
SKAP1Q86WV1 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SKAP1Q86WV1 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SKAP1Q86WV1 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SKAP1Q86WV1 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SKAP1Q86WV1 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SKAP1Q86WV1 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.81■□□□□ 0.6
SKAP1Q86WV1 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SKAP1Q86WV1 AC069120.2-201ENST00000524091 540 ntBASIC18.81■□□□□ 0.6
SKAP1Q86WV1 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SKAP1Q86WV1 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.81■□□□□ 0.6
SKAP1Q86WV1 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.81■□□□□ 0.6
SKAP1Q86WV1 AL662799.1-202ENST00000614205 422 ntBASIC18.81■□□□□ 0.6
SKAP1Q86WV1 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SKAP1Q86WV1 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SKAP1Q86WV1 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.81■□□□□ 0.6
SKAP1Q86WV1 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
SKAP1Q86WV1 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SKAP1Q86WV1 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SKAP1Q86WV1 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SKAP1Q86WV1 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SKAP1Q86WV1 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SKAP1Q86WV1 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC18.81■□□□□ 0.6
SKAP1Q86WV1 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC18.81■□□□□ 0.6
SKAP1Q86WV1 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SKAP1Q86WV1 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC18.8■□□□□ 0.6
SKAP1Q86WV1 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SKAP1Q86WV1 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SKAP1Q86WV1 AGGF1P1-201ENST00000509500 2073 ntBASIC18.8■□□□□ 0.6
SKAP1Q86WV1 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SKAP1Q86WV1 USP4-203ENST00000415188 1454 ntTSL 3 BASIC18.8■□□□□ 0.6
SKAP1Q86WV1 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SKAP1Q86WV1 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC18.8■□□□□ 0.6
SKAP1Q86WV1 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SKAP1Q86WV1 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SKAP1Q86WV1 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.8■□□□□ 0.6
SKAP1Q86WV1 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.8■□□□□ 0.6
SKAP1Q86WV1 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.8■□□□□ 0.6
SKAP1Q86WV1 AC114501.2-201ENST00000439631 535 ntBASIC18.8■□□□□ 0.6
SKAP1Q86WV1 AC009477.1-201ENST00000452936 217 ntBASIC18.8■□□□□ 0.6
SKAP1Q86WV1 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SKAP1Q86WV1 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.8■□□□□ 0.6
SKAP1Q86WV1 AC092337.1-201ENST00000568699 1129 ntBASIC18.8■□□□□ 0.6
SKAP1Q86WV1 AC107373.2-201ENST00000607735 490 ntBASIC18.8■□□□□ 0.6
SKAP1Q86WV1 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
SKAP1Q86WV1 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.8■□□□□ 0.6
SKAP1Q86WV1 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC18.8■□□□□ 0.6
SKAP1Q86WV1 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms