Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
KRT28Q7Z3Y7 DPY19L2P5-201ENST00000456300 331 ntBASIC19.99■□□□□ 0.79
KRT28Q7Z3Y7 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC19.99■□□□□ 0.79
KRT28Q7Z3Y7 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC19.99■□□□□ 0.79
KRT28Q7Z3Y7 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC19.99■□□□□ 0.79
KRT28Q7Z3Y7 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC19.99■□□□□ 0.79
KRT28Q7Z3Y7 AC011247.3-201ENST00000603297 438 ntBASIC19.99■□□□□ 0.79
KRT28Q7Z3Y7 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
KRT28Q7Z3Y7 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KRT28Q7Z3Y7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KRT28Q7Z3Y7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
KRT28Q7Z3Y7 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT28Q7Z3Y7 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT28Q7Z3Y7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KRT28Q7Z3Y7 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT28Q7Z3Y7 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC19.99■□□□□ 0.79
KRT28Q7Z3Y7 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
KRT28Q7Z3Y7 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT28Q7Z3Y7 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
KRT28Q7Z3Y7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT28Q7Z3Y7 R3HDM2P2-201ENST00000401880 2116 ntBASIC19.99■□□□□ 0.79
KRT28Q7Z3Y7 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KRT28Q7Z3Y7 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.99■□□□□ 0.79
KRT28Q7Z3Y7 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT28Q7Z3Y7 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
KRT28Q7Z3Y7 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 GUSBP10-201ENST00000417412 665 ntBASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 FAU-202ENST00000434372 533 ntTSL 2 BASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 AREG-202ENST00000502307 956 ntTSL 5 BASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 AC073592.2-201ENST00000623062 780 ntBASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 AL513523.2-202ENST00000427283 2040 ntBASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 F10-203ENST00000409306 1450 ntTSL 3 BASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 AP005117.1-202ENST00000581724 1908 ntBASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT28Q7Z3Y7 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KRT28Q7Z3Y7 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT28Q7Z3Y7 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT28Q7Z3Y7 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
KRT28Q7Z3Y7 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT28Q7Z3Y7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT28Q7Z3Y7 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT28Q7Z3Y7 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC19.97■□□□□ 0.79
KRT28Q7Z3Y7 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC19.97■□□□□ 0.79
KRT28Q7Z3Y7 NHP2-202ENST00000314397 599 ntTSL 2 BASIC19.97■□□□□ 0.79
KRT28Q7Z3Y7 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT28Q7Z3Y7 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT28Q7Z3Y7 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
KRT28Q7Z3Y7 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT28Q7Z3Y7 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT28Q7Z3Y7 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT28Q7Z3Y7 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC19.97■□□□□ 0.79
KRT28Q7Z3Y7 HERC2P11-201ENST00000562845 725 ntBASIC19.97■□□□□ 0.79
KRT28Q7Z3Y7 AC100756.2-201ENST00000569537 736 ntBASIC19.97■□□□□ 0.79
KRT28Q7Z3Y7 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC19.97■□□□□ 0.79
KRT28Q7Z3Y7 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC19.97■□□□□ 0.79
KRT28Q7Z3Y7 HKR1-225ENST00000592168 566 ntTSL 4 BASIC19.97■□□□□ 0.79
KRT28Q7Z3Y7 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC19.97■□□□□ 0.79
KRT28Q7Z3Y7 AC002472.4-201ENST00000641915 272 ntBASIC19.97■□□□□ 0.79
KRT28Q7Z3Y7 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT28Q7Z3Y7 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT28Q7Z3Y7 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT28Q7Z3Y7 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT28Q7Z3Y7 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT28Q7Z3Y7 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT28Q7Z3Y7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KRT28Q7Z3Y7 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KRT28Q7Z3Y7 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC19.97■□□□□ 0.79
KRT28Q7Z3Y7 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT28Q7Z3Y7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms