Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TUBA1AQ71U36 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TUBA1AQ71U36 AL080243.2-201ENST00000418783 582 ntBASIC14.04□□□□□ -0.16
TUBA1AQ71U36 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.04□□□□□ -0.16
TUBA1AQ71U36 HMGN1P19-201ENST00000436976 333 ntBASIC14.04□□□□□ -0.16
TUBA1AQ71U36 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TUBA1AQ71U36 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.04□□□□□ -0.16
TUBA1AQ71U36 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.04□□□□□ -0.16
TUBA1AQ71U36 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.04□□□□□ -0.16
TUBA1AQ71U36 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TUBA1AQ71U36 AL158211.3-201ENST00000607385 239 ntBASIC14.04□□□□□ -0.16
TUBA1AQ71U36 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.04□□□□□ -0.16
TUBA1AQ71U36 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.04□□□□□ -0.16
TUBA1AQ71U36 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.04□□□□□ -0.16
TUBA1AQ71U36 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TUBA1AQ71U36 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.04□□□□□ -0.16
TUBA1AQ71U36 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.04□□□□□ -0.16
TUBA1AQ71U36 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
TUBA1AQ71U36 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TUBA1AQ71U36 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TUBA1AQ71U36 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TUBA1AQ71U36 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.04□□□□□ -0.16
TUBA1AQ71U36 AC100757.3-201ENST00000622361 1406 ntBASIC14.04□□□□□ -0.16
TUBA1AQ71U36 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.04□□□□□ -0.16
TUBA1AQ71U36 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.04□□□□□ -0.16
TUBA1AQ71U36 BNIP3P1-202ENST00000550043 1585 ntBASIC14.04□□□□□ -0.16
TUBA1AQ71U36 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.04□□□□□ -0.16
TUBA1AQ71U36 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TUBA1AQ71U36 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TUBA1AQ71U36 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TUBA1AQ71U36 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TUBA1AQ71U36 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 AC243562.2-201ENST00000561247 970 ntBASIC14.03□□□□□ -0.16
TUBA1AQ71U36 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 TEX28P1-201ENST00000613479 1221 ntBASIC14.03□□□□□ -0.16
TUBA1AQ71U36 TEX28P2-201ENST00000617764 1221 ntBASIC14.03□□□□□ -0.16
TUBA1AQ71U36 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TUBA1AQ71U36 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TUBA1AQ71U36 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TUBA1AQ71U36 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TUBA1AQ71U36 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
TUBA1AQ71U36 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TUBA1AQ71U36 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
TUBA1AQ71U36 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
TUBA1AQ71U36 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
TUBA1AQ71U36 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TUBA1AQ71U36 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.02□□□□□ -0.16
TUBA1AQ71U36 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
TUBA1AQ71U36 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TUBA1AQ71U36 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.02□□□□□ -0.16
TUBA1AQ71U36 AC097359.2-201ENST00000604992 2389 ntBASIC14.02□□□□□ -0.16
TUBA1AQ71U36 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.02□□□□□ -0.16
TUBA1AQ71U36 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.02□□□□□ -0.16
TUBA1AQ71U36 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.02□□□□□ -0.16
TUBA1AQ71U36 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TUBA1AQ71U36 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TUBA1AQ71U36 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TUBA1AQ71U36 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TUBA1AQ71U36 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TUBA1AQ71U36 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TUBA1AQ71U36 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms