Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 AL627223.1-201ENST00000416693 442 ntBASIC13.29□□□□□ -0.28
C11orf88Q6PI97 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 AC005237.2-201ENST00000434368 219 ntBASIC13.29□□□□□ -0.28
C11orf88Q6PI97 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 CNN2P2-201ENST00000443536 909 ntBASIC13.29□□□□□ -0.28
C11orf88Q6PI97 CNN2P3-201ENST00000450201 906 ntBASIC13.29□□□□□ -0.28
C11orf88Q6PI97 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 AC106028.4-201ENST00000614509 607 ntBASIC13.29□□□□□ -0.28
C11orf88Q6PI97 AL136317.3-201ENST00000618497 906 ntBASIC13.29□□□□□ -0.28
C11orf88Q6PI97 LINC00628-201ENST00000628516 1289 ntBASIC13.29□□□□□ -0.28
C11orf88Q6PI97 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 TFAMP1-201ENST00000412727 736 ntBASIC13.28□□□□□ -0.28
C11orf88Q6PI97 AC092474.2-201ENST00000424288 719 ntBASIC13.28□□□□□ -0.28
C11orf88Q6PI97 AC093724.1-201ENST00000448659 1027 ntBASIC13.28□□□□□ -0.28
C11orf88Q6PI97 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 RNA5SP421-201ENST00000516864 134 ntBASIC13.28□□□□□ -0.28
C11orf88Q6PI97 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 AC093028.1-201ENST00000622998 982 ntBASIC13.28□□□□□ -0.28
C11orf88Q6PI97 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 CICP17-201ENST00000418553 2377 ntBASIC13.28□□□□□ -0.28
C11orf88Q6PI97 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
C11orf88Q6PI97 PTPRVP-205ENST00000641549 5067 ntBASIC13.28□□□□□ -0.28
C11orf88Q6PI97 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.27□□□□□ -0.28
C11orf88Q6PI97 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.27□□□□□ -0.28
C11orf88Q6PI97 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms