Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 SPDYE17-201ENST00000412399 783 ntBASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 AL079307.3-201ENST00000556114 283 ntBASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 AL450472.2-201ENST00000603663 1156 ntBASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 AL133215.2-201ENST00000609242 977 ntBASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 AP000845.1-201ENST00000581677 2131 ntBASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM53Q6P2H8 KRT8P12-202ENST00000472924 1397 ntBASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 FO393414.2-201ENST00000405153 598 ntBASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 PHKG1P2-201ENST00000457537 863 ntBASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 AC092183.1-201ENST00000469884 875 ntBASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 HLA-V-204ENST00000476601 1289 ntBASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 AC051619.7-201ENST00000568314 623 ntBASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 AC073592.8-201ENST00000624126 511 ntBASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
TMEM53Q6P2H8 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.96□□□□□ -0.18
TMEM53Q6P2H8 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
TMEM53Q6P2H8 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
TMEM53Q6P2H8 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
TMEM53Q6P2H8 BX640514.1-201ENST00000583223 1918 ntBASIC13.96□□□□□ -0.18
TMEM53Q6P2H8 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
TMEM53Q6P2H8 FO538757.1-201ENST00000623083 1397 ntBASIC13.96□□□□□ -0.18
TMEM53Q6P2H8 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms