Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 AC015802.1-201ENST00000588104 1449 ntBASIC14.57□□□□□ -0.08
PPP4R4Q6NUP7 AC018529.2-202ENST00000611482 3087 ntBASIC14.57□□□□□ -0.08
PPP4R4Q6NUP7 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PPP4R4Q6NUP7 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PPP4R4Q6NUP7 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PPP4R4Q6NUP7 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.57□□□□□ -0.08
PPP4R4Q6NUP7 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 AL512638.1-201ENST00000457493 794 ntBASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 AC007967.4-201ENST00000614700 386 ntBASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 AC090114.2-201ENST00000608477 7054 ntBASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 AC011474.4-201ENST00000623523 2076 ntBASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
PPP4R4Q6NUP7 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 AL512356.2-201ENST00000546955 174 ntBASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 AL450472.2-201ENST00000603663 1156 ntBASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms