Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD47Q08722 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CD47Q08722 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.09□□□□□ -0.15
CD47Q08722 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.09□□□□□ -0.15
CD47Q08722 TPT1P11-201ENST00000458482 498 ntBASIC14.09□□□□□ -0.15
CD47Q08722 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.09□□□□□ -0.15
CD47Q08722 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.09□□□□□ -0.15
CD47Q08722 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD47Q08722 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.09□□□□□ -0.15
CD47Q08722 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.09□□□□□ -0.15
CD47Q08722 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.09□□□□□ -0.15
CD47Q08722 AC079781.4-201ENST00000641908 219 ntBASIC14.09□□□□□ -0.15
CD47Q08722 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD47Q08722 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD47Q08722 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD47Q08722 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD47Q08722 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.09□□□□□ -0.15
CD47Q08722 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CD47Q08722 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
CD47Q08722 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CD47Q08722 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD47Q08722 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD47Q08722 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CD47Q08722 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CD47Q08722 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CD47Q08722 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.09□□□□□ -0.15
CD47Q08722 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.09□□□□□ -0.15
CD47Q08722 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CD47Q08722 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD47Q08722 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CD47Q08722 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.09□□□□□ -0.15
CD47Q08722 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD47Q08722 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD47Q08722 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.09□□□□□ -0.15
CD47Q08722 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD47Q08722 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CD47Q08722 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CD47Q08722 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.08□□□□□ -0.15
CD47Q08722 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
CD47Q08722 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CD47Q08722 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CD47Q08722 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.08□□□□□ -0.15
CD47Q08722 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.08□□□□□ -0.16
CD47Q08722 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.08□□□□□ -0.16
CD47Q08722 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
CD47Q08722 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD47Q08722 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD47Q08722 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD47Q08722 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.08□□□□□ -0.16
CD47Q08722 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD47Q08722 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.08□□□□□ -0.16
CD47Q08722 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD47Q08722 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD47Q08722 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.08□□□□□ -0.16
CD47Q08722 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.08□□□□□ -0.16
CD47Q08722 DNAJB3-202ENST00000449667 1266 ntBASIC14.08□□□□□ -0.16
CD47Q08722 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
CD47Q08722 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD47Q08722 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CD47Q08722 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.08□□□□□ -0.16
CD47Q08722 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.08□□□□□ -0.16
CD47Q08722 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
CD47Q08722 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD47Q08722 AC027612.4-201ENST00000605371 583 ntBASIC14.08□□□□□ -0.16
CD47Q08722 LINC00628-201ENST00000628516 1289 ntBASIC14.08□□□□□ -0.16
CD47Q08722 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
CD47Q08722 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD47Q08722 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD47Q08722 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD47Q08722 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD47Q08722 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CD47Q08722 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD47Q08722 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.08□□□□□ -0.16
CD47Q08722 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD47Q08722 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD47Q08722 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.07□□□□□ -0.16
CD47Q08722 REXO1L4P-201ENST00000605109 1937 ntBASIC14.07□□□□□ -0.16
CD47Q08722 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD47Q08722 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CD47Q08722 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD47Q08722 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD47Q08722 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.07□□□□□ -0.16
CD47Q08722 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD47Q08722 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD47Q08722 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD47Q08722 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CD47Q08722 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD47Q08722 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD47Q08722 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD47Q08722 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD47Q08722 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.07□□□□□ -0.16
CD47Q08722 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD47Q08722 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.07□□□□□ -0.16
CD47Q08722 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD47Q08722 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.07□□□□□ -0.16
CD47Q08722 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.07□□□□□ -0.16
CD47Q08722 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CD47Q08722 AL589739.1-201ENST00000607720 493 ntBASIC14.07□□□□□ -0.16
CD47Q08722 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.07□□□□□ -0.16
CD47Q08722 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms