Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IRX3P78415 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC17.61■□□□□ 0.41
IRX3P78415 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
IRX3P78415 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IRX3P78415 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
IRX3P78415 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IRX3P78415 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
IRX3P78415 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.61■□□□□ 0.41
IRX3P78415 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IRX3P78415 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
IRX3P78415 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IRX3P78415 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IRX3P78415 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.61■□□□□ 0.41
IRX3P78415 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.61■□□□□ 0.41
IRX3P78415 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IRX3P78415 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.61■□□□□ 0.41
IRX3P78415 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.61■□□□□ 0.41
IRX3P78415 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC17.61■□□□□ 0.41
IRX3P78415 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.6■□□□□ 0.41
IRX3P78415 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
IRX3P78415 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
IRX3P78415 AL359183.1-201ENST00000623796 2132 ntBASIC17.6■□□□□ 0.41
IRX3P78415 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IRX3P78415 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
IRX3P78415 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC17.6■□□□□ 0.41
IRX3P78415 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IRX3P78415 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
IRX3P78415 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.6■□□□□ 0.41
IRX3P78415 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IRX3P78415 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
IRX3P78415 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
IRX3P78415 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.6■□□□□ 0.41
IRX3P78415 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IRX3P78415 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
IRX3P78415 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC17.6■□□□□ 0.41
IRX3P78415 AP003171.2-201ENST00000528208 925 ntBASIC17.6■□□□□ 0.41
IRX3P78415 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
IRX3P78415 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.6■□□□□ 0.41
IRX3P78415 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.6■□□□□ 0.41
IRX3P78415 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.6■□□□□ 0.41
IRX3P78415 CU633904.3-201ENST00000624042 1029 ntBASIC17.6■□□□□ 0.41
IRX3P78415 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IRX3P78415 AC055811.4-201ENST00000624039 1754 ntBASIC17.6■□□□□ 0.41
IRX3P78415 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IRX3P78415 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
IRX3P78415 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IRX3P78415 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
IRX3P78415 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IRX3P78415 AC126755.1-201ENST00000525846 6405 ntBASIC17.6■□□□□ 0.41
IRX3P78415 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.6■□□□□ 0.41
IRX3P78415 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
IRX3P78415 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IRX3P78415 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.6■□□□□ 0.41
IRX3P78415 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IRX3P78415 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IRX3P78415 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
IRX3P78415 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
IRX3P78415 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IRX3P78415 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IRX3P78415 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IRX3P78415 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
IRX3P78415 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IRX3P78415 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
IRX3P78415 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
IRX3P78415 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC17.59■□□□□ 0.41
IRX3P78415 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
IRX3P78415 AC112504.1-201ENST00000623415 1841 ntBASIC17.59■□□□□ 0.41
IRX3P78415 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IRX3P78415 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
IRX3P78415 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IRX3P78415 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
IRX3P78415 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.59■□□□□ 0.41
IRX3P78415 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
IRX3P78415 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IRX3P78415 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IRX3P78415 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.59■□□□□ 0.41
IRX3P78415 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.59■□□□□ 0.41
IRX3P78415 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.59■□□□□ 0.41
IRX3P78415 AL354877.1-201ENST00000424412 413 ntBASIC17.59■□□□□ 0.41
IRX3P78415 AL133466.1-201ENST00000447582 150 ntBASIC17.59■□□□□ 0.41
IRX3P78415 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC17.59■□□□□ 0.41
IRX3P78415 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC17.59■□□□□ 0.41
IRX3P78415 RN7SL769P-201ENST00000469386 295 ntBASIC17.59■□□□□ 0.41
IRX3P78415 AC021723.1-201ENST00000486306 515 ntBASIC17.59■□□□□ 0.41
IRX3P78415 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC17.59■□□□□ 0.41
IRX3P78415 AC245884.6-201ENST00000515672 1067 ntBASIC17.59■□□□□ 0.41
IRX3P78415 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.59■□□□□ 0.41
IRX3P78415 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.59■□□□□ 0.41
IRX3P78415 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
IRX3P78415 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.59■□□□□ 0.41
IRX3P78415 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
IRX3P78415 AC091812.3-201ENST00000621362 345 ntBASIC17.59■□□□□ 0.41
IRX3P78415 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IRX3P78415 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC17.59■□□□□ 0.41
IRX3P78415 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IRX3P78415 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.59■□□□□ 0.41
IRX3P78415 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IRX3P78415 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.59■□□□□ 0.41
IRX3P78415 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
IRX3P78415 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms